RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 FAM71BQ8TC56 605 aa15.07■□□□□ 0
SNCA-204ENST00000394989 HELQQ8TDG4 1101 aa15.07■□□□□ 0
SNCA-204ENST00000394989 TAS1R2Q8TE23 839 aa15.07■□□□□ 0
SNCA-204ENST00000394989 EPS8L1Q8TE68 723 aa15.07■□□□□ 0
SNCA-204ENST00000394989 LMBR1Q8WVP7 490 aa15.07■□□□□ 0
SNCA-204ENST00000394989 POMGNT1Q8WZA1 660 aa15.07■□□□□ 0
SNCA-204ENST00000394989 EXOC4Q96A65 974 aa15.07■□□□□ 0
SNCA-204ENST00000394989 PCDHB18PQ96TA0 734 aa15.07■□□□□ 0
SNCA-204ENST00000394989 MED4Q9NPJ6 270 aa15.07■□□□□ 0
SNCA-204ENST00000394989 ZNFX1Q9P2E3 1918 aaKnown RBP15.07■□□□□ 0
SNCA-204ENST00000394989 HNRNPDLO14979 420 aaKnown RBP15.07■□□□□ 0
SNCA-204ENST00000394989 RAD51CO43502 376 aa15.07■□□□□ 0
SNCA-204ENST00000394989 GGCXP38435 758 aa15.07■□□□□ 0
SNCA-204ENST00000394989 CYP24A1Q07973 514 aa15.07■□□□□ 0
SNCA-204ENST00000394989 XKR3Q5GH77 459 aa15.07■□□□□ 0
SNCA-204ENST00000394989 DCAF12L1Q5VU92 463 aa15.07■□□□□ 0
SNCA-204ENST00000394989 NOP9Q86U38 636 aaKnown RBP15.07■□□□□ 0
SNCA-204ENST00000394989 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
SNCA-204ENST00000394989 PPM1KQ8N3J5 372 aa15.07■□□□□ 0
SNCA-204ENST00000394989 RASGEF1CQ8N431 466 aa15.07■□□□□ 0
SNCA-204ENST00000394989 ISCUQ9H1K1 167 aa15.07■□□□□ 0
SNCA-204ENST00000394989 TMEM8AQ9HCN3 771 aa15.07■□□□□ 0
SNCA-204ENST00000394989 ADM5C9JUS6 153 aa15.06■□□□□ 0
SNCA-204ENST00000394989 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
SNCA-204ENST00000394989 EPHB4P54760 987 aa15.06■□□□□ 0
SNCA-204ENST00000394989 GUCY2DQ02846 1103 aa15.06■□□□□ 0
SNCA-204ENST00000394989 PRPF4BQ13523 1007 aaKnown RBP15.06■□□□□ 0
SNCA-204ENST00000394989 BRDTQ58F21 947 aaPredicted RBP15.06■□□□□ 0
SNCA-204ENST00000394989 SLC47A2Q86VL8 602 aa15.06■□□□□ 0
SNCA-204ENST00000394989 RPUSD2Q8IZ73 545 aaKnown RBP15.06■□□□□ 0
SNCA-204ENST00000394989 MICALL1Q8N3F8 863 aa15.06■□□□□ 0
SNCA-204ENST00000394989 AP1M1Q9BXS5 423 aa15.06■□□□□ 0
SNCA-204ENST00000394989 MAF1Q9H063 256 aa15.06■□□□□ 0
SNCA-204ENST00000394989 EPB41L5Q9HCM4 733 aa15.06■□□□□ 0
SNCA-204ENST00000394989 NOC2LQ9Y3T9 749 aaKnown RBP15.06■□□□□ 0
SNCA-204ENST00000394989 ALDH5A1P51649 535 aaPredicted RBP15.06■□□□□ 0
SNCA-204ENST00000394989 GPC3P51654 580 aa15.06■□□□□ 0
SNCA-204ENST00000394989 KCTD19Q17RG1 926 aaPredicted RBP15.06■□□□□ 0
SNCA-204ENST00000394989 SEPT14Q6ZU15 432 aa15.06■□□□□ 0
SNCA-204ENST00000394989 KLHL7Q8IXQ5 586 aa15.06■□□□□ 0
SNCA-204ENST00000394989 TSEN2Q8NCE0 465 aaKnown RBP15.06■□□□□ 0
SNCA-204ENST00000394989 SHC3Q92529 594 aa15.06■□□□□ 0
SNCA-204ENST00000394989 CEP89Q96ST8 783 aa15.06■□□□□ 0
SNCA-204ENST00000394989 EFCC1Q9HA90 598 aa15.06■□□□□ 0
SNCA-204ENST00000394989 DDX3YO15523 660 aaKnown RBP15.06■□□□□ 0
SNCA-204ENST00000394989 CYP26A1O43174 497 aa15.06■□□□□ 0
SNCA-204ENST00000394989 USP8P40818 1118 aa15.06■□□□□ 0
SNCA-204ENST00000394989 WNT7BP56706 349 aa15.06■□□□□ 0
SNCA-204ENST00000394989 EMC2Q15006 297 aa15.06■□□□□ 0
SNCA-204ENST00000394989 SV2AQ7L0J3 742 aa15.06■□□□□ 0
SNCA-204ENST00000394989 TMC2Q8TDI7 906 aa15.06■□□□□ 0
SNCA-204ENST00000394989 FBXO41Q8TF61 875 aa15.06■□□□□ 0
SNCA-204ENST00000394989 TMEM143Q96AN5 459 aa15.06■□□□□ 0
SNCA-204ENST00000394989 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.06■□□□□ 0
SNCA-204ENST00000394989 ACBD3Q9H3P7 528 aa15.06■□□□□ 0
SNCA-204ENST00000394989 NFU1Q9UMS0 254 aa15.06■□□□□ 0
SNCA-204ENST00000394989 PGRMC1O00264 195 aaKnown RBP15.05■□□□□ -0
SNCA-204ENST00000394989 FTLP02792 175 aaPredicted RBP15.05■□□□□ -0
SNCA-204ENST00000394989 FAM153BP0C7A2 387 aa15.05■□□□□ -0
SNCA-204ENST00000394989 FAM153CQ494X1 144 aa15.05■□□□□ -0
SNCA-204ENST00000394989 GPD1LQ8N335 351 aa15.05■□□□□ -0
SNCA-204ENST00000394989 CASKIN2Q8WXE0 1202 aa15.05■□□□□ -0
SNCA-204ENST00000394989 CAVIN3Q969G5 261 aa15.05■□□□□ -0
SNCA-204ENST00000394989 PCYT2Q99447 389 aa15.05■□□□□ -0
SNCA-204ENST00000394989 FAM213AQ9BRX8 229 aa15.05■□□□□ -0
SNCA-204ENST00000394989 HAPLN2Q9GZV7 340 aa15.05■□□□□ -0
SNCA-204ENST00000394989 ZNF302Q9NR11 478 aa15.05■□□□□ -0
SNCA-204ENST00000394989 CHORDC1Q9UHD1 332 aaPredicted RBP15.05■□□□□ -0
SNCA-204ENST00000394989 FAM153AQ9UHL3 310 aa15.05■□□□□ -0
SNCA-204ENST00000394989 LRRC37A2A6NM11 1700 aa15.05■□□□□ -0
SNCA-204ENST00000394989 IGKV6D-21A0A0A0MT36 114 aa15.05■□□□□ -0
SNCA-204ENST00000394989 SOWAHBA6NEL2 793 aa15.05■□□□□ -0
SNCA-204ENST00000394989 RNF40O75150 1001 aa15.05■□□□□ -0
SNCA-204ENST00000394989 DLATP10515 647 aaKnown RBP15.05■□□□□ -0
SNCA-204ENST00000394989 UBA1P22314 1058 aaKnown RBP15.05■□□□□ -0
SNCA-204ENST00000394989 EMBQ6PCB8 327 aa15.05■□□□□ -0
SNCA-204ENST00000394989 IFT20Q8IY31 132 aa15.05■□□□□ -0
SNCA-204ENST00000394989 FBXL13Q8NEE6 735 aa15.05■□□□□ -0
SNCA-204ENST00000394989 VTI1AQ96AJ9 217 aa15.05■□□□□ -0
SNCA-204ENST00000394989 RAB20Q9NX57 234 aa15.05■□□□□ -0
SNCA-204ENST00000394989 AMFRQ9UKV5 643 aa15.05■□□□□ -0
SNCA-204ENST00000394989 SIP14410 1827 aa15.05■□□□□ -0
SNCA-204ENST00000394989 IRF6O14896 467 aa15.04■□□□□ -0
SNCA-204ENST00000394989 OATP04181 439 aa15.04■□□□□ -0
SNCA-204ENST00000394989 ITGA4P13612 1032 aa15.04■□□□□ -0
SNCA-204ENST00000394989 GARTP22102 1010 aa15.04■□□□□ -0
SNCA-204ENST00000394989 EDNRBP24530 442 aa15.04■□□□□ -0
SNCA-204ENST00000394989 RIOX2Q8IUF8 465 aa15.04■□□□□ -0
SNCA-204ENST00000394989 PROCA1Q8NCQ7 364 aaPredicted RBP15.04■□□□□ -0
SNCA-204ENST00000394989 ASAP3Q8TDY4 903 aa15.04■□□□□ -0
SNCA-204ENST00000394989 ZNF516Q92618 1163 aa15.04■□□□□ -0
SNCA-204ENST00000394989 DHX33Q9H6R0 707 aaKnown RBP15.04■□□□□ -0
SNCA-204ENST00000394989 MMEP08473 750 aa15.04■□□□□ -0
SNCA-204ENST00000394989 POLGP54098 1239 aaPredicted RBP15.04■□□□□ -0
SNCA-204ENST00000394989 TNNC1P63316 161 aa15.04■□□□□ -0
SNCA-204ENST00000394989 DHX38Q92620 1227 aaKnown RBP15.04■□□□□ -0
SNCA-204ENST00000394989 TATDN2Q93075 761 aa15.04■□□□□ -0
SNCA-204ENST00000394989 CALR3Q96L12 384 aaKnown RBP15.04■□□□□ -0
SNCA-204ENST00000394989 IFT74Q96LB3 600 aa15.04■□□□□ -0
SNCA-204ENST00000394989 FAM204AQ9H8W3 233 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms