RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 SLC20A1Q8WUM9 679 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.73■□□□□ 0.272e-6■■■■■ 50.8
PTBP1-204ENST00000394601 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 FRMD4BQ9Y2L6 1034 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 DDX39AO00148 427 aaKnown RBP16.72■□□□□ 0.27
PTBP1-204ENST00000394601 MYL7Q01449 175 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 LLGL1Q15334 1064 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 NEK9Q8TD19 979 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 ATP8B4Q8TF62 1192 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 A8MUI8 341 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 HADHBP55084 474 aaKnown RBP16.72■□□□□ 0.27
PTBP1-204ENST00000394601 GTF2BQ00403 316 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 HS2ST1Q7LGA3 356 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 TAF4BQ92750 862 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 TEPSINQ96N21 525 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 ST6GALNAC4Q9H4F1 302 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 LRRC4CQ9HCJ2 640 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 TMOD2Q9NZR1 351 aa16.72■□□□□ 0.27
PTBP1-204ENST00000394601 ASTN2O75129 1339 aaPredicted RBP16.72■□□□□ 0.27
PTBP1-204ENST00000394601 P4HBP07237 508 aaKnown RBP16.71■□□□□ 0.27
PTBP1-204ENST00000394601 ZNF483Q8TF39 744 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-204ENST00000394601 TXLNGYQ9BZA5 131 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 AMACRQ9UHK6 382 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
PTBP1-204ENST00000394601 COL11A1P12107 1806 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-204ENST00000394601 ARHGEF35A5YM69 484 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 WNT10BO00744 389 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 ADSSP30520 456 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 HSD17B3P37058 310 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 RDH13Q8NBN7 331 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 SLC17A8Q8NDX2 589 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
PTBP1-204ENST00000394601 ALG3Q92685 438 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 ERVK-5Q9HDB9 667 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 EMSYQ7Z589 1322 aa16.71■□□□□ 0.27
PTBP1-204ENST00000394601 PLS3P13797 630 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 CHRNB2P17787 502 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 CUL1Q13616 776 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 FAM47EQ6ZV65 393 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 VPS36Q86VN1 386 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 ZDHHC14Q8IZN3 488 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 SYCE1Q8N0S2 351 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 RAPGEF5Q92565 580 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 PCIF1Q9H4Z3 704 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 CNOT8Q9UFF9 292 aaKnown RBP16.71■□□□□ 0.26
PTBP1-204ENST00000394601 CCPG1Q9ULG6 757 aa16.71■□□□□ 0.26
PTBP1-204ENST00000394601 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 K7ENM7 598 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 PMM2O15305 246 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 ATP9AO75110 1047 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 ATP6V1G2O95670 118 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 KAT5Q92993 513 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 SLC38A10Q9HBR0 1119 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 PKD2L1Q9P0L9 805 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 ATP8A1Q9Y2Q0 1164 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 DOCK5Q9H7D0 1870 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 CCDC188H7C350 402 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 EXOC3O60645 756 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 CCNE2O96020 404 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 SLC8A1P32418 973 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 NCKAP1LP55160 1127 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 DHX9Q08211 1270 aaKnown RBP16.7■□□□□ 0.26
PTBP1-204ENST00000394601 LRRC14Q15048 493 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 CCDC38Q502W7 563 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 MIER3Q7Z3K6 550 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 CAMKK2Q96RR4 588 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 PCDHB18PQ96TA0 734 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 AGPAT1Q99943 283 aa16.7■□□□□ 0.26
PTBP1-204ENST00000394601 CELF4Q9BZC1 486 aaKnown RBP16.7■□□□□ 0.26
PTBP1-204ENST00000394601 NOCTQ9UK39 431 aaKnown RBP16.7■□□□□ 0.26
PTBP1-204ENST00000394601 KRIT1O00522 736 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 RFX1P22670 979 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 DYDC1Q8WWB3 177 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ZNF341Q9BYN7 854 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ANKRD62A6NC57 917 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 MAPK13O15264 365 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 TTI1O43156 1089 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ADRB2P07550 413 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 VCAM1P19320 739 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 VAMP7P51809 220 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ZKSCAN8Q15776 578 aaPredicted RBP16.69■□□□□ 0.26
PTBP1-204ENST00000394601 STXBP4Q6ZWJ1 553 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 SLITRK6Q9H5Y7 841 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 TMBIM4Q9HC24 238 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 GPRC5CQ9NQ84 441 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 LCTP09848 1927 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 H0Y3Z8 333 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ASNSP08243 561 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ABCB4P21439 1286 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 ARHGAP44Q17R89 818 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
PTBP1-204ENST00000394601 KREMEN1Q96MU8 473 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 HSPBP1Q9NZL4 362 aa16.69■□□□□ 0.26
PTBP1-204ENST00000394601 PNMA2Q9UL42 364 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms