RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 IFNB1P01574 187 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 CYP3A4P08684 503 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 PLS3P13797 630 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 CNGA1P29973 690 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 RPL21P46778 160 aaKnown RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 RPS6P62753 249 aaKnown RBP11.31□□□□□ -0.6
ACTN1-203ENST00000394419 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 TATDN2Q93075 761 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 ZSWIM1Q9BR11 485 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 ZMYM2Q9UBW7 1377 aa11.31□□□□□ -0.6
ACTN1-203ENST00000394419 ASNSP08243 561 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CHRNA3P32297 505 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 LIG4P49917 911 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 KRT39Q6A163 491 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CCDC197Q8NCU1 140 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 HAUS1Q96CS2 278 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 C11orf70Q9BRQ4 267 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 FEM1BQ9UK73 627 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SPDYE2BA6NHP3 402 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 FOXO6A8MYZ6 492 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 PHF2O75151 1096 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SPDYE6P0CI01 402 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 NEFHP12036 1026 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CTNNA2P26232 953 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 NSFP46459 744 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 ACOT2P49753 483 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 EIF3BP55884 814 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 MTM1Q13496 603 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SWSAP1Q6NVH7 229 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SPATS2Q86XZ4 545 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 DAW1Q8N136 415 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CHMP6Q96FZ7 201 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 TMEM59LQ9UK28 342 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 LAMB2P55268 1798 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 DLEC1Q9Y238 1755 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 BTNL10A8MVZ5 291 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 DDX3YO15523 660 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SLC26A4O43511 780 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 ATP9AO75110 1047 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 ANXA13P27216 316 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SPP2Q13103 211 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CCDC13Q8IYE1 715 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 FAM151AQ8WW52 585 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 RNF25Q96BH1 459 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 ZNF668Q96K58 619 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 PABPC3Q9H361 631 aaKnown RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 CD248Q9HCU0 757 aa11.3□□□□□ -0.6
ACTN1-203ENST00000394419 TTC7AQ9ULT0 858 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
ACTN1-203ENST00000394419 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 ZBED4O75132 1171 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 SCP2P22307 547 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 ECHS1P30084 290 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 KRT17Q04695 432 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 DHX34Q14147 1143 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 UGCGQ16739 394 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CD302Q8IX05 232 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PRELID2Q8N945 189 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 ATP8B4Q8TF62 1192 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■■ 54.4
ACTN1-203ENST00000394419 PWWP2AQ96N64 755 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 XPO6Q96QU8 1125 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 IWS1Q96ST2 819 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 TRIM7Q9C029 511 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 COL20A1Q9P218 1284 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PARP2Q9UGN5 583 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 STK38LQ9Y2H1 464 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 MYH11P35749 1972 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 PODXLO00592 558 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CES2O00748 559 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 GAS8O95995 478 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 ADRB2P07550 413 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 RARAP10276 462 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 CETN2P41208 172 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 KYNUQ16719 465 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 TAOK1Q7L7X3 1001 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 TBC1D1Q86TI0 1168 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 FBXL13Q8NEE6 735 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 GIMAP7Q8NHV1 300 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 RIT2Q99578 217 aa11.29□□□□□ -0.6
ACTN1-203ENST00000394419 DDX23Q9BUQ8 820 aaKnown RBP11.29□□□□□ -0.6
ACTN1-203ENST00000394419 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms