RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 CCDC184Q52MB2 194 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 RFX8Q6ZV50 586 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 GALNT4Q8N4A0 578 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 PI4K2BQ8TCG2 481 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 ZBTB10Q96DT7 871 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 MAGED4Q96JG8 741 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 C20orf96Q9NUD7 363 aaPredicted RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 CTNNAL1Q9UBT7 734 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 RGS12O14924 1447 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 EIF4E1BA6NMX2 242 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 EVPLLA8MZ36 301 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 EIF2S3P41091 472 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 KBTBD3Q8NAB2 608 aa14.13□□□□□ -0.15
USP49-203ENST00000394253 MTO1Q9Y2Z2 717 aaKnown RBP14.13□□□□□ -0.15
USP49-203ENST00000394253 NNMTP40261 264 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 THEMIS2Q5TEJ8 643 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 TRPM8Q7Z2W7 1104 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 NME9Q86XW9 330 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 AVENQ9NQS1 362 aaPredicted RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 ZFATQ9P243 1243 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 HEATR1Q9H583 2144 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 KCNQ4P56696 695 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 HEATR6Q6AI08 1181 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 ZNF654Q8IZM8 581 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 UBXN6Q9BZV1 441 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ATAD2BQ9ULI0 1458 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 CTTNBP2Q8WZ74 1663 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 MAGEA10P43363 369 aaPredicted RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 HES6Q96HZ4 224 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ACAP3Q96P50 834 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ARMT1Q9H993 441 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 SARS2Q9NP81 518 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 ATPIF1Q9UII2 106 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 TBC1D12O60347 775 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 PPP6R2O75170 966 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 EIF4A3P38919 411 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 FCHO2Q0JRZ9 810 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 PABPC4Q13310 644 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP49-203ENST00000394253 DHX34Q14147 1143 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 NANOGNBQ7Z5D8 188 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 LONP2Q86WA8 852 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 THTPAQ9BU02 230 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 NPHS2Q9NP85 383 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 MYH7BA7E2Y1 1941 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 SDE2Q6IQ49 451 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ESRP1Q6NXG1 681 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 TOGARAM2Q6ZUX3 1019 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 SLC10A4Q96EP9 437 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 ENOPH1Q9UHY7 261 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 MAP3K5Q99683 1374 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 BTN3A2P78410 334 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ARHGAP22Q7Z5H3 698 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 FAM129BQ96TA1 746 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 CARD14Q9BXL6 1004 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 ZNF862O60290 1169 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 SNUPNO95149 360 aaKnown RBP14.12□□□□□ -0.15
USP49-203ENST00000394253 CCDC130P13994 396 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 RNFT2Q96EX2 444 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 POLR3EQ9NVU0 708 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 DNAJC12Q9UKB3 198 aa14.12□□□□□ -0.15
USP49-203ENST00000394253 RRM2P31350 389 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 ZNF618Q5T7W0 954 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 JARID2Q92833 1246 aaPredicted RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 ARL8AQ96BM9 186 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 RAB2AP61019 212 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 RNASE11Q8TAA1 199 aaKnown RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 CFAP43Q8NDM7 1665 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 ASXL3Q9C0F0 2248 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 DNAJC7Q99615 494 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 SPATA16Q9BXB7 569 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 IDH3BO43837 385 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 PFKFB2O60825 505 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 STAT5AP42229 794 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 STAT5BP51692 787 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 TNNI3KQ59H18 835 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 SYDE1Q6ZW31 735 aaPredicted RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 WDR48Q8TAF3 677 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 FPGT-TNNI3KV9GXZ4 949 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 E7EWF7 191 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 SMAPO00193 183 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 RFT1Q96AA3 541 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 CDHR1Q96JP9 859 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 FYNP06241 537 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 MXI1P50539 228 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 TCIRG1Q13488 830 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 ZBED8Q8IZ13 594 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 KANSL1LA0AUZ9 987 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 BCL10O95999 233 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 ANXA11P50995 505 aaKnown RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 TFDP2Q14188 446 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 FASTKD5Q7L8L6 764 aaKnown RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 RANBP17Q9H2T7 1088 aaKnown RBP14.11□□□□□ -0.15
USP49-203ENST00000394253 KMT5AQ9NQR1 393 aa14.11□□□□□ -0.15
USP49-203ENST00000394253 DDX56Q9NY93 547 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms