RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PTENP60484 403 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 MBTD1Q05BQ5 628 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 EPHA7Q15375 998 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 ELMSAN1Q6PJG2 1045 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 SLC44A3Q8N4M1 653 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
CHMP3-202ENST00000393773 DYDC2Q96IM9 177 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 CSRNP2Q9H175 543 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
CHMP3-202ENST00000393773 RGL1Q9NZL6 768 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 DLGAP2Q9P1A6 1054 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 ZBTB39O15060 712 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 TGM5O43548 720 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 C1RP00736 705 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 SPATA31D3P0C874 917 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 HTR4Q13639 388 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 CAPSQ13938 189 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 XKR9Q5GH70 373 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 SPATA31D4Q6ZUB0 917 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 GET4Q7L5D6 327 aaPredicted RBP17.12■□□□□ 0.33
CHMP3-202ENST00000393773 GPR152Q8TDT2 470 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 LARP6Q9BRS8 491 aaKnown RBP17.12■□□□□ 0.33
CHMP3-202ENST00000393773 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
CHMP3-202ENST00000393773 ANHXE9PGG2 379 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
CHMP3-202ENST00000393773 REC8O95072 547 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
CHMP3-202ENST00000393773 STK3Q13188 491 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 CTTNQ14247 550 aaKnown RBP17.11■□□□□ 0.33
CHMP3-202ENST00000393773 EARS2Q5JPH6 523 aaKnown RBP17.11■□□□□ 0.33
CHMP3-202ENST00000393773 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 LILRA6Q6PI73 481 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 PALB2Q86YC2 1186 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 APOL6Q9BWW8 343 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 ZSWIM4Q9H7M6 989 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 ARHGEF3Q9NR81 526 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHMP3-202ENST00000393773 GJB4Q9NTQ9 266 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 FNIP2Q9P278 1114 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 ADAM28Q9UKQ2 775 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 GIT1Q9Y2X7 761 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 R4GN57 208 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 STK36Q9NRP7 1315 aa17.11■□□□□ 0.33
CHMP3-202ENST00000393773 FAM205CA6NFA0 338 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 INO80B-WBP1J3KQ70 363 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 B4GALT5O43286 388 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 LMNAP02545 664 aaKnown RBP17.1■□□□□ 0.33
CHMP3-202ENST00000393773 LAMP2P13473 410 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 POU5F1BQ06416 359 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 GRIK3Q13003 919 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 MXD4Q14582 209 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-202ENST00000393773 PIK3AP1Q6ZUJ8 805 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 OTUD6AQ7L8S5 288 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 RIN2Q8WYP3 895 aaPredicted RBP17.1■□□□□ 0.33
CHMP3-202ENST00000393773 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 PRKD2Q9BZL6 878 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 SEMA4AQ9H3S1 761 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 SLC2A4RGQ9NR83 387 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP3-202ENST00000393773 CACNG4Q9UBN1 327 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 CYP46A1Q9Y6A2 500 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 NCOR2Q9Y618 2525 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 COL4A2P08572 1712 aa17.1■□□□□ 0.33
CHMP3-202ENST00000393773 RPL17P18621 184 aaKnown RBP17.09■□□□□ 0.33
CHMP3-202ENST00000393773 RFX1P22670 979 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 AKAP5P24588 427 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 SCRN1Q12765 414 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 TFDP1Q14186 410 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 USP41Q3LFD5 358 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 CPLX2Q6PUV4 134 aaKnown RBP17.09■□□□□ 0.33
CHMP3-202ENST00000393773 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 NAP1L4Q99733 375 aaKnown RBP17.09■□□□□ 0.33
CHMP3-202ENST00000393773 COLEC11Q9BWP8 271 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
CHMP3-202ENST00000393773 STK25O00506 426 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
CHMP3-202ENST00000393773 NR1I2O75469 434 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 ZMYND10O75800 440 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 SLITRK3O94933 977 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 LYPLA2O95372 231 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 DCNP07585 359 aaKnown RBP17.08■□□□□ 0.32
CHMP3-202ENST00000393773 GLULP15104 373 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 GLRA2P23416 452 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 ARL2P36404 184 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 CREMQ03060 361 aa17.08■□□□□ 0.32
CHMP3-202ENST00000393773 SPECC1Q5M775 1068 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms