RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 CPSF3Q9UKF6 684 aaKnown RBP14.52□□□□□ -0.08
USP44-202ENST00000393091 INO80B-WBP1J3KQ70 363 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 PMM2O15305 246 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 CTSHP09668 335 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 CSF2RAP15509 400 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 ATF7P17544 494 aaPredicted RBP14.52□□□□□ -0.09
USP44-202ENST00000393091 HTRA4P83105 476 aaPredicted RBP14.52□□□□□ -0.09
USP44-202ENST00000393091 ECHDC2Q86YB7 292 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.09
USP44-202ENST00000393091 CDT1Q9H211 546 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 GIT1Q9Y2X7 761 aa14.52□□□□□ -0.09
USP44-202ENST00000393091 ANKRD63C9JTQ0 380 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 B4GALT5O43286 388 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 NOLC1Q14978 699 aaKnown RBP eCLIP14.51□□□□□ -0.09
USP44-202ENST00000393091 DBF4BQ8NFT6 615 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 HPS3Q969F9 1004 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 SCLYQ96I15 445 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 MFSD14AQ96MC6 490 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 TSC2P49815 1807 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 PSMA7O14818 248 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 IKBKBO14920 756 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 OGTO15294 1046 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 EXTL3O43909 919 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 PRPF6O94906 941 aaKnown RBP14.51□□□□□ -0.09
USP44-202ENST00000393091 KCNA1Q09470 495 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 CAVIN1Q6NZI2 390 aaKnown RBP14.51□□□□□ -0.09
USP44-202ENST00000393091 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
USP44-202ENST00000393091 ENOX1Q8TC92 643 aaKnown RBP14.51□□□□□ -0.09
USP44-202ENST00000393091 MED15Q96RN5 788 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 PPP1R12CQ9BZL4 782 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 FAM105AQ9NUU6 356 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 CNTN3Q9P232 1028 aa14.51□□□□□ -0.09
USP44-202ENST00000393091 KCNE1P15382 129 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 LRRC55Q6ZSA7 311 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 DUSP9Q99956 384 aaKnown RBP14.5□□□□□ -0.09
USP44-202ENST00000393091 TRIP11Q15643 1979 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 HOXA2O43364 376 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 FGBP02675 491 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 FILIP1Q7Z7B0 1213 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 TOP1MTQ969P6 601 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 PGBD4Q96DM1 585 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 TARS2Q9BW92 718 aaKnown RBP14.5□□□□□ -0.09
USP44-202ENST00000393091 CLTAP09496 248 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 ZSCAN20P17040 1043 aaPredicted RBP14.5□□□□□ -0.09
USP44-202ENST00000393091 LIG4P49917 911 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 EPHB4P54760 987 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 CCL23P55773 120 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 WDR5P61964 334 aaKnown RBP14.5□□□□□ -0.09
USP44-202ENST00000393091 TYRO3Q06418 890 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 ANP32EQ9BTT0 268 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 POLD4Q9HCU8 107 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 DNAH12Q6ZR08 3092 aa14.5□□□□□ -0.09
USP44-202ENST00000393091 MEFVO15553 781 aaPredicted RBP14.49□□□□□ -0.09
USP44-202ENST00000393091 PAX3P23760 479 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 PAK1Q13153 545 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 TMC2Q8TDI7 906 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 DPF3Q92784 378 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 ADPGKQ9BRR6 497 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 USP20Q9Y2K6 914 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 IL18RAPO95256 599 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 CCDC192P0DO97 292 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 SURF1Q15526 300 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 ZBTB6Q15916 424 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 EEF1DP3Q658K8 133 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 SASS6Q6UVJ0 657 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 THAP9Q9H5L6 903 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 PIN4Q9Y237 131 aaKnown RBP14.49□□□□□ -0.09
USP44-202ENST00000393091 IPPQ9Y573 584 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 PCDHB2Q9Y5E7 798 aa14.49□□□□□ -0.09
USP44-202ENST00000393091 CLDN3O15551 220 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 GNA14O95837 355 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 CYP3A5P20815 502 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 RPL13P26373 211 aaKnown RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 MAGEA10P43363 369 aaPredicted RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 DPCR1Q3MIW9 517 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 ANKRD40Q6AI12 368 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 LRSAM1Q6UWE0 723 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 HS2ST1Q7LGA3 356 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 GPD1LQ8N335 351 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 SNX27Q96L92 541 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 SCLT1Q96NL6 688 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 ADAM2Q99965 735 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 ASB7Q9H672 318 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 HNRNPDLO14979 420 aaKnown RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 AMHP03971 560 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 STAG3L1P0CL83 205 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 FKBP3Q00688 224 aaKnown RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 NAB2Q15742 525 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 BRSK2Q8IWQ3 736 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 HACE1Q8IYU2 909 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 CPB2Q96IY4 423 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 LBHD1Q9BQE6 289 aaPredicted RBP14.48□□□□□ -0.09
USP44-202ENST00000393091 ZHX3Q9H4I2 956 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 HSPBP1Q9NZL4 362 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 TTC26A0AVF1 554 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 NR3C1P04150 777 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 PSMD6Q15008 389 aa14.48□□□□□ -0.09
USP44-202ENST00000393091 CMTR2Q8IYT2 770 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms