RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 EEF1GP26641 437 aaKnown RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 KNOP1Q1ED39 458 aaKnown RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 SPECC1LQ69YQ0 1117 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF507Q8TCN5 953 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF473Q8WTR7 871 aaKnown RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 MLXIPQ9HAP2 919 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 MAFBQ9Y5Q3 323 aaPredicted RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 IGSF9BQ9UPX0 1349 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 GOLGA6BA6NDN3 693 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 IFT88Q13099 833 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 PDCLQ13371 301 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 GRB14Q14449 540 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 WHAMMP3Q1A5X7 153 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 METTL7BQ6UX53 244 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 IFNL1Q8IU54 200 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 FAM178BQ8IXR5 827 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF302Q9NR11 478 aa20.48■□□□□ 0.87
CCDC50-202ENST00000392456 SEPT9Q9UHD8 586 aaPredicted RBP20.48■□□□□ 0.87
CCDC50-202ENST00000392456 IGKV6D-21A0A0A0MT36 114 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 GOLGA8KD6RF30 607 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 STRNO43815 780 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 MIIPQ5JXC2 388 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TRIM50Q86XT4 487 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TC2NQ8N9U0 490 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 CCDC43Q96MW1 224 aaKnown RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 ZNF570Q96NI8 536 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 NOD2Q9HC29 1040 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 MYO1AQ9UBC5 1043 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 PLXNB2O15031 1838 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 ATP6V1G1O75348 118 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 KIF4AO95239 1232 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 ATP6V1G2O95670 118 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TFRCP02786 760 aaKnown RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TCF7P36402 384 aaPredicted RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 XRCC4Q13426 336 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 CELF3Q5SZQ8 465 aaKnown RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 TAPT1Q6NXT6 567 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 PLEKHH3Q7Z736 793 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 DPP9Q86TI2 863 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 NPLOC4Q8TAT6 608 aa20.47■□□□□ 0.87
CCDC50-202ENST00000392456 NOC3LQ8WTT2 800 aaKnown RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 MAGEC2Q9UBF1 373 aaPredicted RBP20.47■□□□□ 0.87
CCDC50-202ENST00000392456 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 TGFB1I1O43294 461 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 SNAI1O95863 264 aaPredicted RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MCM3P25205 808 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 CDC25CP30307 473 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 ADKP55263 362 aaKnown RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 FKBP3Q00688 224 aaKnown RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 UBXN1Q04323 297 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 FAM102BQ5T8I3 360 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 ABRAQ8N0Z2 381 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 EPN3Q9H201 632 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 ASB14A6NK59 587 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 RNF225M0QZC1 329 aaPredicted RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 CLIC2O15247 247 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MTIF2P46199 727 aaKnown RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 CUL3Q13618 768 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 BMT2Q1RMZ1 405 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MPHOSPH6Q99547 160 aaKnown RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 GPR20Q99678 358 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 TSG101Q99816 390 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 ZCWPW1Q9H0M4 648 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 XPNPEP1Q9NQW7 623 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 CYP26B1Q9NR63 512 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MYH9P35579 1960 aaKnown RBP20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MYH11P35749 1972 aa20.46■□□□□ 0.87
CCDC50-202ENST00000392456 MTERF2Q49AM1 385 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 BSNDQ8WZ55 320 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 TBC1D31Q96DN5 1066 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 KIFC3Q9BVG8 833 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 KATNBL1Q9H079 304 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 PLXNA1Q9UIW2 1896 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 LGALS16A8MUM7 142 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 KLK7P49862 253 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 PEX3P56589 373 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 ADAM9Q13443 819 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 MAMDC4Q6UXC1 1216 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 CRELD2Q6UXH1 353 aaPredicted RBP20.45■□□□□ 0.86
CCDC50-202ENST00000392456 OTUD6AQ7L8S5 288 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 SEPT1Q8WYJ6 367 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 MAML3Q96JK9 1138 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 STRA6Q9BX79 667 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 PDLIM7Q9NR12 457 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 TRAF3IP3Q9Y228 551 aa20.45■□□□□ 0.86
CCDC50-202ENST00000392456 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.44■□□□□ 0.86
CCDC50-202ENST00000392456 DNM1LO00429 736 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 XKR3Q5GH77 459 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 C17orf99Q6UX52 265 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 CCDC121Q6ZUS5 278 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 SPATA33Q96N06 139 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 NOC4LQ9BVI4 516 aaKnown RBP20.44■□□□□ 0.86
CCDC50-202ENST00000392456 PHACTR1Q9C0D0 580 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.44■□□□□ 0.86
CCDC50-202ENST00000392456 SEL1LQ9UBV2 794 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 HTTP42858 3142 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 TISP43B9A030 160 aa20.44■□□□□ 0.86
CCDC50-202ENST00000392456 TLR2O60603 784 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms