RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 CDT1Q9H211 546 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 STYXL1Q9Y6J8 313 aa16.32■□□□□ 0.2
SUMO1-203ENST00000392246 RANBP2P49792 3224 aaKnown RBP16.31■□□□□ 0.2
SUMO1-203ENST00000392246 ANKRD63C9JTQ0 380 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 DGKIO75912 1065 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 ITGA4P13612 1032 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 SNRPFP62306 86 aaKnown RBP16.31■□□□□ 0.2
SUMO1-203ENST00000392246 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 NXF3Q9H4D5 531 aaKnown RBP16.31■□□□□ 0.2
SUMO1-203ENST00000392246 UBN1Q9NPG3 1134 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 HES2Q9Y543 173 aa16.31■□□□□ 0.2
SUMO1-203ENST00000392246 A0A0B4J269 797 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 TLL1O43897 1013 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 HARSP12081 509 aaKnown RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 HTRA4P83105 476 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 KYAT1Q16773 422 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 LRIT3Q3SXY7 679 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 FAM109BQ6ICB4 259 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 HS2ST1Q7LGA3 356 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 GUF1Q8N442 669 aaKnown RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 POMGNT1Q8WZA1 660 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 LPPQ93052 612 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 YME1L1Q96TA2 773 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 RAD9AQ99638 391 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 APOL6Q9BWW8 343 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 HAPLN2Q9GZV7 340 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 CGNQ9P2M7 1197 aaKnown RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 MAPK8IP1Q9UQF2 711 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 INSL6Q9Y581 213 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 FNDC1Q4ZHG4 1894 aaPredicted RBP16.3■□□□□ 0.2
SUMO1-203ENST00000392246 GBF1Q92538 1859 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 ZMYM2Q9UBW7 1377 aa16.3■□□□□ 0.2
SUMO1-203ENST00000392246 TISP43B9A030 160 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 BIN1O00499 593 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 FGFR1P11362 822 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 GARTP22102 1010 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 ADSSP30520 456 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 GRM5P41594 1212 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 PRCPP42785 496 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 MORC3Q14149 939 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 AGMOQ6ZNB7 445 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 THNSL1Q8IYQ7 743 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 SMYD4Q8IYR2 804 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 ABI1Q8IZP0 508 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 ZNF689Q96CS4 500 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 RSAD1Q9HA92 442 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 SNTG2Q9NY99 539 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 CITO14578 2027 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 MEIS3P2A8K0S8 358 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 OGTO15294 1046 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 AKAP5P24588 427 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 PPP1R2P41236 205 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 RABGGTBP53611 331 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 STIM1Q13586 685 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 CLLU1OSQ5K130 101 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 SYAP1Q96A49 352 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 TMEM117Q9H0C3 514 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 KCTD10Q9H3F6 313 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 TYW1Q9NV66 732 aaKnown RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 AGO2Q9UKV8 859 aaKnown RBP16.29■□□□□ 0.2
SUMO1-203ENST00000392246 PCDHA11Q9Y5I1 949 aa16.29■□□□□ 0.2
SUMO1-203ENST00000392246 TRIP11Q15643 1979 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 PDXKO00764 312 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 KIAA0391O15091 583 aaKnown RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 OFD1O75665 1012 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 BMP6P22004 513 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 OSTNP61366 133 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 SMAD3P84022 425 aaKnown RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 RAB30Q15771 203 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 SKOR2Q2VWA4 1001 aaPredicted RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 RBM43Q6ZSC3 357 aaKnown RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 CEP120Q8N960 986 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 HELQQ8TDG4 1101 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 CBWD1Q9BRT8 395 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 RC3H2Q9HBD1 1191 aaKnown RBP16.28■□□□□ 0.2
SUMO1-203ENST00000392246 AGPAT3Q9NRZ7 376 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 TMEM63CQ9P1W3 806 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
SUMO1-203ENST00000392246 TBKBP1A7MCY6 615 aa16.27■□□□□ 0.2
SUMO1-203ENST00000392246 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms