RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 NFKBIZQ9BYH8 718 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 GPR88Q9GZN0 384 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 TUT1Q9H6E5 874 aaKnown RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 LUC7LQ9NQ29 371 aaKnown RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 FLRT1Q9NZU1 646 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 KAT6AQ92794 2004 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 PTK2Q05397 1052 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 POU5F1BQ06416 359 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 MAPK6Q16659 721 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 SMC1BQ8NDV3 1235 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZBTB45Q96K62 511 aaPredicted RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 APBA2Q99767 749 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 ABT1Q9ULW3 272 aaKnown RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 TFR2Q9UP52 801 aa12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
SMARCAL1-203ENST00000392128 TOM1L1O75674 476 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 URI1O94763 535 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 IGHA2P01877 340 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 PRKCBP05771 671 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 CCDC172P0C7W6 258 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF865P0CJ78 1059 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 KLRC1P26715 233 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 MAGEA1P43355 309 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 GPC3P51654 580 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 CLCN3P51790 818 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 NLRP11P59045 1033 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 MAP2K1Q02750 393 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 METTL13Q8N6R0 699 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 POP1Q99575 1024 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ANKFY1Q9P2R3 1169 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 GJD2Q9UKL4 321 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 A0A087X0T9 212 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 CTAGE9A4FU28 777 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 A6NJR5 290 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 EVI5O60447 810 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 SLU7O95391 586 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 FAM228BP0C875 321 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 PTENP60484 403 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 IGBP1P78318 339 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 FBXL13Q8NEE6 735 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ACO2Q99798 780 aaKnown RBP12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 FZD8Q9H461 694 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ADAMTS1Q9UHI8 967 aa12.4□□□□□ -0.42
SMARCAL1-203ENST00000392128 ATP8B3O60423 1300 aa12.4□□□□□ -0.43
SMARCAL1-203ENST00000392128 TMEM88BA6NKF7 163 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ACKR2O00590 384 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 KIF3CO14782 793 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 CLDN3O15551 220 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 CA12O43570 354 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 GFPT2O94808 682 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 DLATP10515 647 aaKnown RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ACOT2P49753 483 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 PRAMEF19Q5SWL8 479 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 MTHFD1LQ6UB35 978 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 SV2AQ7L0J3 742 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ARHGEF19Q8IW93 802 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 NLRP4Q96MN2 994 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 NAPGQ99747 312 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 UBE2TQ9NPD8 197 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TOPORSQ9NS56 1045 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TTLL13PA6NNM8 815 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ABLIM1O14639 778 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 FAM189A1O60320 539 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 GJB1P08034 283 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 CYP2B6P20813 491 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TMOD1P28289 359 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 MATR3P43243 847 aaKnown RBP eCLIP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 MBTD1Q05BQ5 628 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 PPFIA1Q13136 1202 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TUBB2AQ13885 445 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 CCL14Q16627 93 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TSHZ1Q6ZSZ6 1077 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 SECISBP2LQ93073 1101 aaKnown RBP12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZBTB10Q96DT7 871 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 TUBB2BQ9BVA1 445 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 RAB20Q9NX57 234 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 NENFQ9UMX5 172 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 DUSP10Q9Y6W6 482 aa12.39□□□□□ -0.43
SMARCAL1-203ENST00000392128 ZC3H11AO75152 810 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 LRRN2O75325 713 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 PROZP22891 400 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 PHKA2P46019 1235 aa12.38□□□□□ -0.43
SMARCAL1-203ENST00000392128 MCL1Q07820 350 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms