RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TBC1D8O95759 1140 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 DRP2Q13474 957 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 CAPSQ13938 189 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 DHX37Q8IY37 1157 aaKnown RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 LRRC57Q8N9N7 239 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 GTF3C2Q8WUA4 911 aaPredicted RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 EHD2Q9NZN4 543 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 AGO2Q9UKV8 859 aaKnown RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 PPME1Q9Y570 386 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 LOC102724159A0A0B4J2E5 919 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 KIAA0391O15091 583 aaKnown RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 PAFAH1B1P43034 410 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 DNA2P51530 1060 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 MFAP3P55082 362 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 PWP2Q15269 919 aaKnown RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 LONRF2Q1L5Z9 754 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 WDR93Q6P2C0 686 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 PALB2Q86YC2 1186 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 SPATA4Q8NEY3 305 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 TPCN2Q8NHX9 752 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 SLC20A1Q8WUM9 679 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 PSPC1Q8WXF1 523 aaKnown RBP19.66■□□□□ 0.74
ACTN4-202ENST00000390009 SPATA33Q96N06 139 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 HAPLN2Q9GZV7 340 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 TMEM134Q9H6X4 195 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 SMARCAL1Q9NZC9 954 aa19.66■□□□□ 0.74
ACTN4-202ENST00000390009 UNCXA6NJT0 531 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 ERLIN1O75477 346 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 USP8P40818 1118 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 NLRP11P59045 1033 aaKnown RBP19.65■□□□□ 0.74
ACTN4-202ENST00000390009 SLFN12LQ6IEE8 588 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 PLPPR4Q7Z2D5 763 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 FAM71AQ8IYT1 594 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 KRT222Q8N1A0 295 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 GPRC5AQ8NFJ5 357 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 HELQQ8TDG4 1101 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 COPS5Q92905 334 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 NT5C1BQ96P26 610 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 TARS2Q9BW92 718 aaKnown RBP19.65■□□□□ 0.74
ACTN4-202ENST00000390009 GOLPH3Q9H4A6 298 aa19.65■□□□□ 0.74
ACTN4-202ENST00000390009 TARSL2A2RTX5 802 aaKnown RBP19.64■□□□□ 0.74
ACTN4-202ENST00000390009 ASB14A6NK59 587 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 PDHXO00330 501 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 ADCY3O60266 1144 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 TMEM253P0C7T8 217 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 TXNP10599 105 aaKnown RBP19.64■□□□□ 0.74
ACTN4-202ENST00000390009 MMGT1Q8N4V1 131 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 ATP8B4Q8TF62 1192 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 PRPF31Q8WWY3 499 aaKnown RBP19.64■□□□□ 0.74
ACTN4-202ENST00000390009 SHC3Q92529 594 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 ZBTB45Q96K62 511 aaPredicted RBP19.64■□□□□ 0.74
ACTN4-202ENST00000390009 TAS2R14Q9NYV8 317 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 RNF14Q9UBS8 474 aa19.64■□□□□ 0.74
ACTN4-202ENST00000390009 NCANO14594 1321 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 SASH3O75995 380 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 EDN1P05305 212 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 CETPP11597 493 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 ACOT2P49753 483 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 CLDN10P78369 228 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 CCNA1P78396 465 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 PRPF4BQ13523 1007 aaKnown RBP19.64■□□□□ 0.73
ACTN4-202ENST00000390009 TTLL4Q14679 1199 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 PSMD6Q15008 389 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 CFAP221Q4G0U5 840 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 BEND6Q5SZJ8 279 aaPredicted RBP19.64■□□□□ 0.73
ACTN4-202ENST00000390009 TMEM63BQ5T3F8 832 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 CTNNBL1Q8WYA6 563 aaPredicted RBP19.64■□□□□ 0.73
ACTN4-202ENST00000390009 MS4A14Q96JA4 679 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 MS4A4AQ96JQ5 239 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 ABCB6Q9NP58 842 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 PDGFCQ9NRA1 345 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 ANKFY1Q9P2R3 1169 aa19.64■□□□□ 0.73
ACTN4-202ENST00000390009 ZBTB42B2RXF5 422 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 ABCB4P21439 1286 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 IER5Q5VY09 327 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 CRELD2Q6UXH1 353 aaPredicted RBP19.63■□□□□ 0.73
ACTN4-202ENST00000390009 C15orf39Q6ZRI6 1047 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 ARMCX2Q7L311 632 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 EPS8L1Q8TE68 723 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 LMBR1Q8WVP7 490 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 RFFLQ8WZ73 363 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 ZNF516Q92618 1163 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 FNBP1Q96RU3 617 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 FUT8Q9BYC5 575 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 BTBD19C9JJ37 291 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 SGPL1O95470 568 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 MATR3P43243 847 aaKnown RBP eCLIP19.63■□□□□ 0.733e-7■□□□□ 8.1
ACTN4-202ENST00000390009 DMTNQ08495 405 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
ACTN4-202ENST00000390009 PLCB4Q15147 1175 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 RPS6KA1Q15418 735 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 SLFN11Q7Z7L1 901 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 RPUSD2Q8IZ73 545 aaKnown RBP19.63■□□□□ 0.73
ACTN4-202ENST00000390009 SCFD2Q8WU76 684 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 FAM84AQ96KN4 292 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 MSTO1Q9BUK6 570 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 SUGCTQ9HAC7 445 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 SLC45A1Q9Y2W3 748 aa19.63■□□□□ 0.73
ACTN4-202ENST00000390009 CCL15-CCL14A0A0B4J2E2 113 aa19.62■□□□□ 0.73
ACTN4-202ENST00000390009 ANKRD62A6NC57 917 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms