RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SMG5Q9UPR3 1016 aaKnown RBP13.22□□□□□ -0.29
SOD1-202ENST00000389995 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
SOD1-202ENST00000389995 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 TDP2O95551 362 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
SOD1-202ENST00000389995 TGM1P22735 817 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 LPAL2Q16609 132 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 LILRA6Q6PI73 481 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 ITFG1Q8TB96 612 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
SOD1-202ENST00000389995 SHDQ96IW2 340 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 CPB2Q96IY4 423 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 PLEKHA4Q9H4M7 779 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 CHST7Q9NS84 486 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 IPPQ9Y573 584 aa13.21□□□□□ -0.29
SOD1-202ENST00000389995 ZZEF1O43149 2961 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 SPTLC1O15269 473 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 ZMYND10O75800 440 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 DSC1Q08554 894 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
SOD1-202ENST00000389995 FGF13Q92913 245 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
SOD1-202ENST00000389995 LTB4R2Q9NPC1 389 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 FBXO4Q9UKT5 387 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 PCDHGA2Q9Y5H1 932 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 ATRXP46100 2492 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 ASPMQ8IZT6 3477 aa13.2□□□□□ -0.3
SOD1-202ENST00000389995 SPAG17Q6Q759 2223 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 EML1O00423 815 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 CCL16O15467 120 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 PAPLNO95428 1278 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 TARSP26639 723 aaKnown RBP13.19□□□□□ -0.3
SOD1-202ENST00000389995 GNA11P29992 359 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 SPEM2Q0P670 501 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 FUT10Q6P4F1 479 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 B3GNT9Q6UX72 402 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 ZBTB44Q8NCP5 570 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 TBCKQ8TEA7 893 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 COLEC11Q9BWP8 271 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 KLK14Q9P0G3 267 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
SOD1-202ENST00000389995 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
SOD1-202ENST00000389995 ATG2BQ96BY7 2078 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
SOD1-202ENST00000389995 LILRB5O75023 590 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 ADRB1P08588 477 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 AKAP5P24588 427 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 USP11P51784 963 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 LMNB2Q03252 620 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 RTP2Q5QGT7 225 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 TPRG1Q6ZUI0 275 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 SRGAP1Q7Z6B7 1085 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 CDR2LQ86X02 465 aaPredicted RBP13.18□□□□□ -0.3
SOD1-202ENST00000389995 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 RDM1Q8NG50 284 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 CCDC12Q8WUD4 166 aaPredicted RBP13.18□□□□□ -0.3
SOD1-202ENST00000389995 ING5Q8WYH8 240 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 CHAMP1Q96JM3 812 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 NXF3Q9H4D5 531 aaKnown RBP13.18□□□□□ -0.3
SOD1-202ENST00000389995 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.18□□□□□ -0.3
SOD1-202ENST00000389995 FAM208BQ5VWN6 2430 aa13.18□□□□□ -0.3
SOD1-202ENST00000389995 KIF26AQ9ULI4 1882 aaPredicted RBP13.17□□□□□ -0.3
SOD1-202ENST00000389995 PRR5-ARHGAP8B1AHC4 643 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 ZBTB39O15060 712 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 ADAM12O43184 909 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 TSPAN1O60635 241 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 ERLIN2O94905 339 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 SDHBP21912 280 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 PSMC5P62195 406 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
SOD1-202ENST00000389995 ARHGAP8P85298 464 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 PRKCQQ04759 706 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 MTAPQ13126 283 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 Q4G0T1 1027 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 PPM1JQ5JR12 505 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 CEP57Q86XR8 500 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
SOD1-202ENST00000389995 GSTCDQ8NEC7 633 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
SOD1-202ENST00000389995 SLC7A3Q8WY07 619 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 NELL1Q92832 810 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
SOD1-202ENST00000389995 CEP170P1Q96L14 293 aa13.17□□□□□ -0.3
SOD1-202ENST00000389995 MBOAT7Q96N66 472 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms