RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 KLHL8Q9P2G9 620 aaPredicted RBP15.53■□□□□ 0.08
PSME4-201ENST00000389993 VCAM1P19320 739 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 TKFCQ3LXA3 575 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 PCGF5Q86SE9 256 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
PSME4-201ENST00000389993 TTC17Q96AE7 1141 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 CPA4Q9UI42 421 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.53■□□□□ 0.08
PSME4-201ENST00000389993 DFFAO00273 331 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 SCP2P22307 547 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 RAP1GAPP47736 663 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 DUOXA2Q1HG44 320 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 RHOT2Q8IXI1 618 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 MAML1Q92585 1016 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 LPAR1Q92633 364 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 NUDT12Q9BQG2 462 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 MT-ND3P03897 115 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 CLCN3P51790 818 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 HASPINQ8TF76 798 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 BHMTQ93088 406 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 PDLIM2Q96JY6 352 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 AGAP3Q96P47 875 aa15.53■□□□□ 0.08
PSME4-201ENST00000389993 GOLGA8RI6L899 631 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 CDC26Q8NHZ8 85 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 USP33Q8TEY7 942 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 GLIS2Q9BZE0 524 aaPredicted RBP15.52■□□□□ 0.08
PSME4-201ENST00000389993 PDS5AQ29RF7 1337 aaKnown RBP15.52■□□□□ 0.08
PSME4-201ENST00000389993 BRD2P25440 801 aaKnown RBP15.52■□□□□ 0.08
PSME4-201ENST00000389993 GALCP54803 685 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 ACTR2P61160 394 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 NCOA4Q13772 614 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 FRMD5Q7Z6J6 570 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 CDKL2Q92772 493 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 DDX23Q9BUQ8 820 aaKnown RBP15.52■□□□□ 0.08
PSME4-201ENST00000389993 TJP3O95049 919 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.08
PSME4-201ENST00000389993 RRAGCQ9HB90 399 aa15.52■□□□□ 0.08
PSME4-201ENST00000389993 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 THOC5Q13769 683 aaKnown RBP15.52■□□□□ 0.07
PSME4-201ENST00000389993 SURF1Q15526 300 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 OR2W6PQ8NHA6 318 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 APEX2Q9UBZ4 518 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 EPHB1P54762 984 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 NSUN2Q08J23 767 aaKnown RBP eCLIP15.52■□□□□ 0.07
PSME4-201ENST00000389993 MFSD14CQ5VZR4 134 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 CELF4Q9BZC1 486 aaKnown RBP15.52■□□□□ 0.07
PSME4-201ENST00000389993 C2CD2LO14523 706 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 CPB1P15086 417 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 NR1D1P20393 614 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 SPOPLQ6IQ16 392 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 MRFAP1Q9Y605 127 aa15.52■□□□□ 0.07
PSME4-201ENST00000389993 NPTXRO95502 500 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 GNAT1P11488 350 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 XPAP23025 273 aaPredicted RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 CCDC137Q6PK04 289 aaKnown RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 RNF135Q8IUD6 432 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 NEK9Q8TD19 979 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 UBE2Q2Q8WVN8 375 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 PDXKO00764 312 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 PPFIA4O75335 1185 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 GRIK1P39086 918 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 VSNL1P62760 191 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 TNFAIP2Q03169 654 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 DDX42Q86XP3 938 aaKnown RBP eCLIP15.51■□□□□ 0.07
PSME4-201ENST00000389993 SRRM1Q8IYB3 904 aaKnown RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 LBHD1Q9BQE6 289 aaPredicted RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 SLC13A1Q9BZW2 595 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 MED4Q9NPJ6 270 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 TUBE1Q9UJT0 475 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 CDH6P55285 790 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 MUM1L1Q5H9M0 696 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 PPFIBP2Q8ND30 876 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 SEPT1Q8WYJ6 367 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 SARS2Q9NP81 518 aaKnown RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 LMNB2Q03252 620 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 MOB2Q70IA6 237 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 PARD3BQ8TEW8 1205 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 PACSIN1Q9BY11 444 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 SCINQ9Y6U3 715 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 NCF2P19878 526 aaPredicted RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 PPP2R5EQ16537 467 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 XKR3Q5GH77 459 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 CC2D1AQ6P1N0 951 aaPredicted RBP15.51■□□□□ 0.07
PSME4-201ENST00000389993 THEM5Q8N1Q8 247 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 CBWD1Q9BRT8 395 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 TACC3Q9Y6A5 838 aa15.51■□□□□ 0.07
PSME4-201ENST00000389993 ASB14A6NK59 587 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 WNT10BO00744 389 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 CALCAP01258 141 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 IRF1P10914 325 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 CYP11B2P19099 503 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 MAGOHP61326 146 aaKnown RBP15.5■□□□□ 0.07
PSME4-201ENST00000389993 GABPB2Q8TAK5 448 aaPredicted RBP15.5■□□□□ 0.07
PSME4-201ENST00000389993 TRAPPC12Q8WVT3 735 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 ELAC2Q9BQ52 826 aaKnown RBP15.5■□□□□ 0.07
PSME4-201ENST00000389993 SEMA6BQ9H3T3 888 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 SHPRHQ149N8 1683 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 TTI1O43156 1089 aa15.5■□□□□ 0.07
PSME4-201ENST00000389993 GBP1P32455 592 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms