RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 NFRKBQ6P4R8 1299 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 PRIMPOLQ96LW4 560 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MFSD14AQ96MC6 490 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ACO2Q99798 780 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 TCHPQ9BT92 498 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MRPL4Q9BYD3 311 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 C2orf40Q9H1Z8 148 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 Q9Y3F1 56 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 A0A0B4J269 797 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 GTPBP10A4D1E9 387 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ASAP2O43150 1006 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MYCNP04198 464 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 PRKAR2AP13861 404 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MAP2K2P36507 400 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MAP2K1Q02750 393 aaPredicted RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ARID5AQ03989 594 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 REXO1L1PQ8IX06 675 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 NLRP7Q8WX94 980 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ELMO3Q96BJ8 720 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 GINS2Q9Y248 185 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ADGRG1Q9Y653 693 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 ZNF233A6NK53 670 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 CLDN3O15551 220 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 SCP2P22307 547 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 TNFSF9P41273 254 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 RAPGEF1Q13905 1077 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 ENOX2Q16206 610 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 SLFN12LQ6IEE8 588 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 SCLT1Q96NL6 688 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 FZD8Q9H461 694 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 KCND1Q9NSA2 647 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 ARHGAP20Q9P2F6 1191 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 SRRDQ9UH36 339 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 NRCAMQ92823 1304 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 GPR25O00155 361 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 HAS3O00219 553 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 ACKR2O00590 384 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 SEPT4O43236 478 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 TREHO43280 583 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 PNMA6AP0CW24 399 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 PHKA2P46019 1235 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 MXI1P50539 228 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 PRPF4BQ13523 1007 aaKnown RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 EEF1DP3Q658K8 133 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 CFHR5Q9BXR6 569 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 EDEM3Q9BZQ6 932 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 PDE11AQ9HCR9 933 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 HDAC6Q9UBN7 1215 aa13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 EPN1Q9Y6I3 576 aaPredicted RBP13.24□□□□□ -0.29
SPTBN1-203ENST00000389980 RRN3P2A6NIE6 340 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 ABLIM1O14639 778 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 TOM1L1O75674 476 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 NDUFA10O95299 355 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 CYP2C9P11712 490 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 FGFR4P22455 802 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 HNRNPH3P31942 346 aaKnown RBP13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 GPC3P51654 580 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 GJA9P57773 515 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 ATF7IP2Q5U623 682 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 CPB2Q96IY4 423 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 TSKSQ9UJT2 592 aa13.23□□□□□ -0.29
SPTBN1-203ENST00000389980 ABL1P00519 1130 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 CCDC175P0C221 793 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 RARBP10826 455 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.297e-6■■■■□ 21.3
SPTBN1-203ENST00000389980 EIF4A3P38919 411 aaKnown RBP13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 OSTNP61366 133 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 EPC2Q52LR7 807 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 SFMBT2Q5VUG0 894 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 TMC2Q8TDI7 906 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 SEMA4DQ92854 862 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 SPAG5Q96R06 1193 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
SPTBN1-203ENST00000389980 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms