RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 KLF6Q99612 283 aaPredicted RBP15.18■□□□□ 0.02
RTF1-201ENST00000389629 HNRNPCP07910 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
RTF1-201ENST00000389629 ANXA13P27216 316 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 PIK3CAP42336 1068 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 VAMP7P51809 220 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 RCN1Q15293 331 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 THEMIS2Q5TEJ8 643 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 SLC26A7Q8TE54 656 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 SCFD1Q8WVM8 642 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 JDP2Q8WYK2 163 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 COMTP21964 271 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PEX3P56589 373 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 GPS1Q13098 491 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 KCNV1Q6PIU1 500 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PASD1Q8IV76 773 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PDIA2Q13087 525 aaKnown RBP15.17■□□□□ 0.02
RTF1-201ENST00000389629 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 ANKMY2Q8IV38 441 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PDIK1LQ8N165 341 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 LRRC43Q8N309 656 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 XXYLT1Q8NBI6 393 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 TNFRSF25Q93038 417 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 CARD9Q9H257 536 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 JMJD4Q9H9V9 463 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 ZNF711Q9Y462 761 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 CYP26A1O43174 497 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 KCNQ2O43526 872 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 DNAJC8O75937 253 aaPredicted RBP15.17■□□□□ 0.02
RTF1-201ENST00000389629 KRT19P08727 400 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 BPIFB4P59827 614 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 AP2B1P63010 937 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 NR1H3Q13133 447 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 LAMB3Q13751 1172 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 GEN1Q17RS7 908 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 KCNK18Q7Z418 384 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 CFAP36Q96G28 342 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PFASO15067 1338 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 SLC16A3O15427 465 aaKnown RBP15.17■□□□□ 0.02
RTF1-201ENST00000389629 OVGP1Q12889 678 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 PDCD2Q16342 344 aaPredicted RBP15.17■□□□□ 0.02
RTF1-201ENST00000389629 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 SLC30A5Q8TAD4 765 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 MORC4Q8TE76 937 aa15.17■□□□□ 0.02
RTF1-201ENST00000389629 RBM15Q96T37 977 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■□□□□ 10.4
RTF1-201ENST00000389629 METTL5Q9NRN9 209 aaKnown RBP15.17■□□□□ 0.02
RTF1-201ENST00000389629 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 ENO1P06733 434 aaKnown RBP15.16■□□□□ 0.02
RTF1-201ENST00000389629 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 CNGA1P29973 690 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 PDE1BQ01064 536 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 KIF22Q14807 665 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 NLRX1Q86UT6 975 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 TRIM11Q96F44 468 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 TMEM237Q96Q45 408 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 COMMD10Q9Y6G5 202 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 ESYT2A0FGR8 921 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 STAM2O75886 525 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 SAT1P21673 171 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 HADHQ16836 314 aaKnown RBP15.16■□□□□ 0.02
RTF1-201ENST00000389629 ERICH1Q86X53 443 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 RFX6Q8HWS3 928 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 BAP1Q92560 729 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 BCAP29Q9UHQ4 241 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 DNAJC6O75061 913 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 EYA4O95677 639 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 CAV1Q03135 178 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 STAT4Q14765 748 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 CATSPER3Q86XQ3 398 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 SUDS3Q9H7L9 328 aaPredicted RBP15.16■□□□□ 0.02
RTF1-201ENST00000389629 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 COPEO14579 308 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 CAPN9O14815 690 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 ASAP2O43150 1006 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 GGPS1O95749 300 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 MX2P20592 715 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 TRIML2Q8N7C3 387 aa15.16■□□□□ 0.02
RTF1-201ENST00000389629 TCP10L2B9ZVM9 353 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 DNM1LO00429 736 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 CCDC22O60826 627 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 TNFRSF8P28908 595 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 RABGAP1LQ5R372 815 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 TXNRD3Q86VQ6 643 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 ARHGAP18Q8N392 663 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 C11orf70Q9BRQ4 267 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 CALN1Q9BXU9 219 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 KMT5AQ9NQR1 393 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 RHBDL2Q9NX52 303 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 MED24O75448 989 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 VHLP40337 213 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 ITGA8P53708 1063 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 OLFML2BQ68BL8 750 aa15.15■□□□□ 0.02
RTF1-201ENST00000389629 PPWD1Q96BP3 646 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms