RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 SNHG28P0DPA3 235 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 MYBP10242 640 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 Q3C1V9 767 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 FAM47CQ5HY64 1035 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 FAM160B1Q5W0V3 765 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 PHLDB3Q6NSJ2 640 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 ACCSQ96QU6 501 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 UBR2Q8IWV8 1755 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 CICQ96RK0 1608 aaPredicted RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 ZNF233A6NK53 670 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 CYP11B2P19099 503 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 HHATQ5VTY9 493 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 CDKAL1Q5VV42 579 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 ARMC3Q5W041 872 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 NLRP4Q96MN2 994 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 PNMA3Q9UL41 463 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 TJP1Q07157 1748 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 SART1O43290 800 aaKnown RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 PGK2P07205 417 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 YWHABP31946 246 aaKnown RBP20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 JAK3P52333 1124 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 PSMC5P62195 406 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 PNMA5Q96PV4 448 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 GCNT4Q9P109 453 aa20.17■□□□□ 0.82
PPFIA1-202ENST00000389547 SPOPO43791 374 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 UNC45AQ9H3U1 944 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 JPH1Q9HDC5 661 aaPredicted RBP20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 PMS1P54277 932 aaKnown RBP20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 KCNH2Q12809 1159 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 TRPC3Q13507 836 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 SH2D4BQ5SQS7 431 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 GSTA5Q7RTV2 222 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 HAS1Q92839 578 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 SYNCQ9H7C4 482 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 PEX10O60683 326 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 LRRC34Q8IZ02 419 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 B4GALNT2Q8NHY0 566 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 TMBIM4Q9HC24 238 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 SLC9A2Q9UBY0 812 aa20.16■□□□□ 0.82
PPFIA1-202ENST00000389547 VWA5AO00534 786 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 CIB2O75838 187 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 TRIM49P0CI25 452 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 TRIM49CP0CI26 452 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 ADCY2Q08462 1091 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 TKFCQ3LXA3 575 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 BRDTQ58F21 947 aaPredicted RBP20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 CAVIN3Q969G5 261 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 PBKQ96KB5 322 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 RUSC1Q9BVN2 902 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 FGGP02679 453 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 CCDC62Q6P9F0 684 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 PLVAPQ9BX97 442 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 DNAJC17Q9NVM6 304 aaKnown RBP20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 CTTNBP2NLQ9P2B4 639 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 K7ERI5 159 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 EML1O00423 815 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 GRIN3BO60391 1043 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 VGLL4Q14135 290 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 NAALADL2Q58DX5 795 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 ANKRD20A3Q5VUR7 823 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 BZW1Q7L1Q6 419 aaKnown RBP20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 ZBTB33Q86T24 672 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 MMP19Q99542 508 aa20.15■□□□□ 0.82
PPFIA1-202ENST00000389547 DENND3A2RUS2 1198 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 TCP11X1B4DZS4 312 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 BCRP11274 1271 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 NQO1P15559 274 aaKnown RBP20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 DYNC1I2Q13409 638 aaKnown RBP20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 CREG2Q8IUH2 290 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 ZBTB8OSQ8IWT0 167 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 AGAP11Q8TF27 550 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 AKT3Q9Y243 479 aa20.14■□□□□ 0.82
PPFIA1-202ENST00000389547 TMEM150BA6NC51 233 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 ACSL3O95573 720 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 GGPS1O95749 300 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 COG7P83436 770 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 C6orf118Q5T5N4 469 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 FASTKD5Q7L8L6 764 aaKnown RBP20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 LRRC8CQ8TDW0 803 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 PRCCQ92733 491 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 IGKV6D-41A0A0C4DH26 115 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 RNF225M0QZC1 329 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 UPP2O95045 317 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 FERP16591 822 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 MDM2Q00987 491 aaPredicted RBP20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 TMED1Q13445 227 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 LRIG3Q6UXM1 1119 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 CFAP61Q8NHU2 1237 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 NAF1Q96HR8 494 aaKnown RBP20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 GOLPH3Q9H4A6 298 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 BLOC1S4Q9NUP1 217 aa20.14■□□□□ 0.81
PPFIA1-202ENST00000389547 MYCP01106 439 aaPredicted RBP20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 RCN2Q14257 317 aa20.13■□□□□ 0.81
PPFIA1-202ENST00000389547 ERO1BQ86YB8 467 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms