RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 TMCO1Q9UM00 188 aa15.7■□□□□ 0.1
VPS9D1-201ENST00000389386 SLC4A7Q9Y6M7 1214 aa15.7■□□□□ 0.1
VPS9D1-201ENST00000389386 USH1CQ9Y6N9 552 aa15.7■□□□□ 0.1
VPS9D1-201ENST00000389386 ABCD1P33897 745 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 RASSF2P50749 326 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 RRP1BQ14684 758 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 CCDC6Q16204 474 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 LCA5Q86VQ0 697 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 U2AF1L4Q8WU68 220 aaKnown RBP15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 IL17RBQ9NRM6 502 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 CYP1A1P04798 512 aaPredicted RBP15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 PLCG2P16885 1265 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 VCAM1P19320 739 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 MARK3P27448 753 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 CHRNA3P32297 505 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 EPS15P42566 896 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 TTC27Q6P3X3 843 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 C4orf50Q6ZRC1 276 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 FAM47EQ6ZV65 393 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 PRELID2Q8N945 189 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 SLC35G2Q8TBE7 412 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 ALG3Q92685 438 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 MKNK2Q9HBH9 465 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 STARD13Q9Y3M8 1113 aa15.69■□□□□ 0.1
VPS9D1-201ENST00000389386 RIMBP2O15034 1052 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ALAS1P13196 640 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 RASIP1Q5U651 963 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ZNF449Q6P9G9 518 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ARHGEF18Q6ZSZ5 1173 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 CCDC25Q86WR0 208 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 RAD54LQ92698 747 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 NT5C3AQ9H0P0 336 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ARPP21Q9UBL0 812 aaPredicted RBP15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 C6orf229H3BNL8 230 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 CBX6O95503 412 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 GOLGA8HP0CJ92 632 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 STRN3Q13033 797 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 CLUL1Q15846 466 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 RFWD3Q6PCD5 774 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 VPS36Q86VN1 386 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 FLAD1Q8NFF5 587 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 SPATA16Q9BXB7 569 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 STX8Q9UNK0 236 aa15.68■□□□□ 0.1
VPS9D1-201ENST00000389386 POTEFA5A3E0 1075 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 CETN3O15182 167 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 ACSL3O95573 720 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 POTEIP0CG38 1075 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 POTEJP0CG39 1038 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 PTPN4P29074 926 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 MOGSQ13724 837 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 RCN1Q15293 331 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 SLC35G1Q2M3R5 365 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 ACBD5Q5T8D3 534 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 SPTY2D1Q68D10 685 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 HEATR3Q7Z4Q2 680 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 ZNF804AQ7Z570 1209 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 WDR66Q8TBY9 1149 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 FAM163AQ96GL9 167 aaPredicted RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 CDC42EP4Q9H3Q1 356 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 CD209Q9NNX6 404 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 NCANO14594 1321 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 DCTN3O75935 186 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 COASYQ13057 564 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 LSAMPQ13449 338 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 KPNB1Q14974 876 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 AADACL2Q6P093 401 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 LRRC74BQ6ZQY2 392 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 ZDHHC14Q8IZN3 488 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 CYP4X1Q8N118 509 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 C7orf43Q8WVR3 580 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 DNAJC19Q96DA6 116 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 RBM17Q96I25 401 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 HAPLN3Q96S86 360 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 FGFBP2Q9BYJ0 223 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 DHX36Q9H2U1 1008 aaKnown RBP15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 BARHL2Q9NY43 387 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 NKIRAS1Q9NYS0 192 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 POLLQ9UGP5 575 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 MAGEB2O15479 319 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 PON1P27169 355 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 TXKP42681 527 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 BTDP43251 543 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 RFFLQ8WZ73 363 aa15.67■□□□□ 0.1
VPS9D1-201ENST00000389386 TTLL1O95922 423 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 CTNNA2P26232 953 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 SLC34A1Q06495 639 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 FAM26FQ5R3K3 315 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 DSTYKQ6XUX3 929 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 SEPT14Q6ZU15 432 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 PNMA1Q8ND90 353 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 SLC30A5Q8TAD4 765 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 OLIG1Q8TAK6 271 aa15.66■□□□□ 0.1
VPS9D1-201ENST00000389386 MIPOL1Q8TD10 442 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms