RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 OR7D4Q8NG98 312 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 KLHDC4Q8TBB5 520 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 NSUN6Q8TEA1 469 aaKnown RBP6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 ZNF526Q8TF50 670 aaPredicted RBP6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 TMX3Q96JJ7 454 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 TMEM140Q9NV12 185 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 GPRC5DQ9NZD1 345 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 CTDP1Q9Y5B0 961 aaPredicted RBP6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 NR2E3Q9Y5X4 410 aa6.79□□□□□ -1.32
RNU6-40P-201ENST00000384254 PLEKHD1A6NEE1 506 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 GOLIM4O00461 696 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 APAF1O14727 1248 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 PMM2O15305 246 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 TOX4O94842 621 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 JUNP05412 331 aaKnown RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 SMARCA1P28370 1054 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 CSF2RBP32927 897 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 NEK3P51956 506 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 MAP2K6P52564 334 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 BPIFB4P59827 614 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 GPSM2P81274 684 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 NOGQ13253 232 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 GALEQ14376 348 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 RAB39AQ14964 217 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 ATP2B3Q16720 1220 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 VWA3BQ502W6 1294 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 NPNTQ6UXI9 565 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 USP30Q70CQ3 517 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 GPR155Q7Z3F1 870 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 TMEM151BQ8IW70 566 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 TXNDC5Q8NBS9 432 aaKnown RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 HOXB13Q92826 284 aaPredicted RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 LCORQ96JN0 433 aaPredicted RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 TNIP3Q96KP6 325 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 FAM167AQ96KS9 214 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 CDC5LQ99459 802 aaKnown RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 JADE2Q9NQC1 790 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 SMG5Q9UPR3 1016 aaKnown RBP6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 PCDHB1Q9Y5F3 818 aa6.78□□□□□ -1.32
RNU6-40P-201ENST00000384254 A6NNZ2 444 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 MTSS1O43312 755 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 PQBP1O60828 265 aaKnown RBP6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 ITGA10O75578 1167 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 VSIG10L2P0DP72 767 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 SYN1P17600 705 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 PTPN7P35236 360 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 AFF3P51826 1226 aaKnown RBP6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 DSC2Q02487 901 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 DLX2Q07687 328 aaPredicted RBP6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 ZNF827Q17R98 1081 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 RNF220Q5VTB9 566 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 Q6ZVL8 140 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 ADAMTS17Q8TE56 1095 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 RAB24Q969Q5 203 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 PDCD2LQ9BRP1 358 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 SLC6A15Q9H2J7 730 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 CHST12Q9NRB3 414 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 CNNM1Q9NRU3 951 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 ING3Q9NXR8 418 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 CALCOCO1Q9P1Z2 691 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 NCDNQ9UBB6 729 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 TRPS1Q9UHF7 1281 aa6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 FEZ2Q9UHY8 353 aaPredicted RBP6.77□□□□□ -1.33
RNU6-40P-201ENST00000384254 CFAP69A5D8W1 941 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 C2orf78A6NCI8 922 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 H3BUI4 141 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 TEX33O43247 280 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 GPR32O75388 356 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 EIF3JO75822 258 aaKnown RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 ZNF888P0CJ79 500 aaPredicted RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 SREBF1P36956 1147 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 AGFG1P52594 562 aaKnown RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 HK3P52790 923 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 MESP2Q0VG99 397 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 SAFB2Q14151 953 aaKnown RBP eCLIP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 CNN3Q15417 329 aaKnown RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 PKN1Q16512 942 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 HEATR3Q7Z4Q2 680 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 KIAA0319LQ8IZA0 1049 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 ANKRD53Q8N9V6 530 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 OR14K1Q8NGZ2 314 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 LRTOMTQ8WZ04 291 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 MOCS1Q9NZB8 636 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 AJAP1Q9UKB5 411 aaPredicted RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 L1RE1Q9UN81 338 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 NR2E1Q9Y466 385 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 RIPOR2Q9Y4F9 1068 aa6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 MYBBP1AQ9BQG0 1328 aaKnown RBP6.76□□□□□ -1.33
RNU6-40P-201ENST00000384254 IL2RBP14784 551 aa6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 DDCP20711 480 aa6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 PEX2P28328 305 aa6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 SLC6A9P48067 706 aa6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 LINC00310P59036 64 aa6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 ATP2C1P98194 919 aaPredicted RBP6.75□□□□□ -1.33
RNU6-40P-201ENST00000384254 IFIT5Q13325 482 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms