RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ERO1BQ86YB8 467 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 RCCD1A6NED2 376 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 EML1O00423 815 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 NAALADL2Q58DX5 795 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 ANKRD20A3Q5VUR7 823 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 SGSM3Q96HU1 749 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 RPF1Q9H9Y2 349 aaKnown RBP20.15■□□□□ 0.82
CSPG5-202ENST00000383738 HESX1Q9UBX0 185 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 PIK3R2O00459 728 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 VAMP7P51809 220 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 DYNLT1P63172 113 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 DRAP1Q14919 205 aaPredicted RBP20.15■□□□□ 0.82
CSPG5-202ENST00000383738 PPP1R21Q6ZMI0 780 aa20.15■□□□□ 0.82
CSPG5-202ENST00000383738 TARS2Q9BW92 718 aaKnown RBP20.15■□□□□ 0.82
CSPG5-202ENST00000383738 OPLAHO14841 1288 aa20.14■□□□□ 0.82
CSPG5-202ENST00000383738 SERPING1P05155 500 aa20.14■□□□□ 0.82
CSPG5-202ENST00000383738 SEPT1Q8WYJ6 367 aa20.14■□□□□ 0.82
CSPG5-202ENST00000383738 ANKRD36BP1Q96IX9 119 aa20.14■□□□□ 0.82
CSPG5-202ENST00000383738 PI4K2AQ9BTU6 479 aa20.14■□□□□ 0.82
CSPG5-202ENST00000383738 KIF1CO43896 1103 aaKnown RBP20.14■□□□□ 0.81
CSPG5-202ENST00000383738 RINT1Q6NUQ1 792 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 SRRM1Q8IYB3 904 aaKnown RBP20.14■□□□□ 0.81
CSPG5-202ENST00000383738 GIMAP8Q8ND71 665 aaPredicted RBP20.14■□□□□ 0.81
CSPG5-202ENST00000383738 C7orf25Q9BPX7 421 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 PDCD2LQ9BRP1 358 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 OSBPL1AQ9BXW6 950 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 KCPQ6ZWJ8 1503 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 CAPN9O14815 690 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 OPHN1O60890 802 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 FERP16591 822 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 ACTR2P61160 394 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 GPRC5AQ8NFJ5 357 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 CASKIN2Q8WXE0 1202 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 CYTH2Q99418 400 aa20.14■□□□□ 0.81
CSPG5-202ENST00000383738 CHN1P15882 459 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 PTPRAP18433 802 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 RNASELQ05823 741 aaKnown RBP20.13■□□□□ 0.81
CSPG5-202ENST00000383738 TRADDQ15628 312 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 C15orf52Q6ZUT6 534 aaKnown RBP20.13■□□□□ 0.81
CSPG5-202ENST00000383738 CNPY4Q8N129 248 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 GPC2Q8N158 579 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 TLR3O15455 904 aaKnown RBP20.13■□□□□ 0.81
CSPG5-202ENST00000383738 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.13■□□□□ 0.81
CSPG5-202ENST00000383738 CDCA5Q96FF9 252 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 HSD3B7Q9H2F3 369 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 VWA5AO00534 786 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 KCNB1Q14721 858 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 TMED2Q15363 201 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 CDO1Q16878 200 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 ECT2Q9H8V3 914 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 NOD2Q9HC29 1040 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 NOC2LQ9Y3T9 749 aaKnown RBP20.13■□□□□ 0.81
CSPG5-202ENST00000383738 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 OR6J1Q8NGC5 347 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 CFAP61Q8NHU2 1237 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 STAMBPL1Q96FJ0 436 aa20.13■□□□□ 0.81
CSPG5-202ENST00000383738 ONECUT3O60422 494 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 SMARCA1P28370 1054 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 SREBF1P36956 1147 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 FXR2P51116 673 aaKnown RBP eCLIP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 LY6KQ17RY6 165 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 TTMPQ5BVD1 217 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 GJC2Q5T442 439 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 HEXIM2Q96MH2 286 aaKnown RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 FAM193BQ96PV7 902 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 GBA2Q9HCG7 927 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 AGO2Q9UKV8 859 aaKnown RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 P4HA1P13674 534 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 RBAKQ9NYW8 714 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 FDX1P10109 184 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 ATP5DP30049 168 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 TCF7P36402 384 aaPredicted RBP20.12■□□□□ 0.81
CSPG5-202ENST00000383738 HSD17B3P37058 310 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 RCN2Q14257 317 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 ABI1Q8IZP0 508 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 FBXL16Q8N461 479 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 OR6B3Q8NGW1 331 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 CEP63Q96MT8 703 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 PACSIN1Q9BY11 444 aa20.12■□□□□ 0.81
CSPG5-202ENST00000383738 CLCN3P51790 818 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 RNF19AQ9NV58 838 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 SUCLA2Q9P2R7 463 aaPredicted RBP20.11■□□□□ 0.81
CSPG5-202ENST00000383738 TCP11X1B4DZS4 312 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 UPP2O95045 317 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 XKR3Q5GH77 459 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 CFAP157Q5JU67 520 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 IL31RAQ8NI17 732 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 TRAPPC12Q8WVT3 735 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 ATP2A1O14983 1001 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 CDKAL1Q5VV42 579 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 FYB2Q5VWT5 728 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 DONSONQ9NYP3 566 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 RNF14Q9UBS8 474 aa20.11■□□□□ 0.81
CSPG5-202ENST00000383738 MTM1Q13496 603 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 ZC3H18Q86VM9 953 aaKnown RBP20.1■□□□□ 0.81
CSPG5-202ENST00000383738 DAGLBQ8NCG7 672 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 HAUS1Q96CS2 278 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
CSPG5-202ENST00000383738 MOV10L1Q9BXT6 1211 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms