RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CCND2P30279 289 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 MMP13P45452 471 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 C9orf131Q5VYM1 1079 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 DDX42Q86XP3 938 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 AP1M1Q9BXS5 423 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 NSRP1Q9H0G5 558 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 STMN4Q9H169 189 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 EBF2Q9HAK2 575 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 NOD2Q9HC29 1040 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 SAMD15Q9P1V8 674 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 STXBP5LQ9Y2K9 1186 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 CSADQ9Y600 493 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PTPRFP10586 1907 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PAPPA2Q9BXP8 1791 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ARHGEF35A5YM69 484 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ADM5C9JUS6 153 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 EIF3DO15371 548 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 YBX3P16989 372 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 HOXD13P35453 343 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF131P52739 623 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 CLNS1AP54105 237 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ADAM9Q13443 819 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PIGWQ7Z7B1 504 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 VSIG10LQ86VR7 867 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 HES6Q96HZ4 224 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PABPC3Q9H361 631 aaKnown RBP9.63□□□□□ -0.87
GPNMB-202ENST00000381990 ACAD9Q9H845 621 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 PARVGQ9HBI0 331 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 NENFQ9UMX5 172 aa9.63□□□□□ -0.87
GPNMB-202ENST00000381990 GOLGA6L10A0A0M3HER8 536 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 CALUO43852 315 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 LYPLA2O95372 231 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 GCNT3O95395 438 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 NR3C2P08235 984 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 H2AFZP0C0S5 128 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 UCHL3P15374 230 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 SCP2P22307 547 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 DRG2P55039 364 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 PTENP60484 403 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 POU5F1Q01860 360 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 PPP1R7Q15435 360 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 H2AFVQ71UI9 128 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 FRMD5Q7Z6J6 570 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 GBP7Q8N8V2 638 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 CCDC63Q8NA47 563 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 NSUN6Q8TEA1 469 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 GPRASP2Q96D09 838 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 TYW1Q9NV66 732 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 DBR1Q9UK59 544 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 OTOFQ9HC10 1997 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 TESPA1A2RU30 521 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 MAFGO15525 162 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 TTI1O43156 1089 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 MMEP08473 750 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 NR2F2P24468 414 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 FLT3P36888 993 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 QARSP47897 775 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 JAK3P52333 1124 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 KRT76Q01546 638 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 HIBCHQ6NVY1 386 aaPredicted RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 DLK2Q6UY11 383 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 NLRX1Q86UT6 975 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 NT5DC3Q86UY8 548 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 MOV10L1Q9BXT6 1211 aaKnown RBP9.62□□□□□ -0.87
GPNMB-202ENST00000381990 TCEAL9Q9UHQ7 104 aa9.62□□□□□ -0.87
GPNMB-202ENST00000381990 MYH11P35749 1972 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 SFI1A8K8P3 1242 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 PPP1R12AO14974 1030 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 BUB1BO60566 1050 aaPredicted RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 AGTP01019 485 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 RPL13P26373 211 aaKnown RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 SFNP31947 248 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 C6orf118Q5T5N4 469 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 DENND2CQ68D51 928 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 DPY19L2Q6NUT2 758 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 STXBP4Q6ZWJ1 553 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 DAAM2Q86T65 1068 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ATXN2LQ8WWM7 1075 aaKnown RBP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 CARD9Q9H257 536 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 CYP39A1Q9NYL5 469 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.61□□□□□ -0.87
GPNMB-202ENST00000381990 AMFRQ9UKV5 643 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 ATP8A1Q9Y2Q0 1164 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 UBE4BO95155 1302 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 WDR64B1ANS9 1081 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 LOC285556D6RIA3 1793 aa9.61□□□□□ -0.87
GPNMB-202ENST00000381990 KIF3CO14782 793 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms