RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 TBX20Q9UMR3 447 aa21.27■■□□□ 1
GTF3A-201ENST00000381140 TNFSF13BQ9Y275 285 aa21.27■■□□□ 1
GTF3A-201ENST00000381140 OFD1O75665 1012 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 FOSL2P15408 326 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 BMPR1AP36894 532 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 RNASELQ05823 741 aaKnown RBP21.26■□□□□ 0.99
GTF3A-201ENST00000381140 COASYQ13057 564 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 DCAF4L1Q3SXM0 396 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 LRRC55Q6ZSA7 311 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 APBB1IPQ7Z5R6 666 aaPredicted RBP21.26■□□□□ 0.99
GTF3A-201ENST00000381140 ZBTB45Q96K62 511 aaPredicted RBP21.26■□□□□ 0.99
GTF3A-201ENST00000381140 FIZ1Q96SL8 496 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 GAD1Q99259 594 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 MRPL9Q9BYD2 267 aaKnown RBP21.26■□□□□ 0.99
GTF3A-201ENST00000381140 SEL1LQ9UBV2 794 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 GDAQ9Y2T3 454 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 RWDD3Q9Y3V2 267 aa21.26■□□□□ 0.99
GTF3A-201ENST00000381140 CSPG5O95196 566 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 GCNT3O95395 438 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 POMCP01189 267 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 LINC00271P0C7V0 271 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 MLH1P40692 756 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 LIG4P49917 911 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 GPM6BQ13491 265 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 CLP1Q92989 425 aaKnown RBP21.25■□□□□ 0.99
GTF3A-201ENST00000381140 HPS3Q969F9 1004 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 PAGE5Q96GU1 130 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 ZFP42Q96MM3 310 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 C7orf25Q9BPX7 421 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 CDT1Q9H211 546 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 CWH43Q9H720 699 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 SNTG2Q9NY99 539 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 USP25Q9UHP3 1055 aa21.25■□□□□ 0.99
GTF3A-201ENST00000381140 ATG2AQ2TAZ0 1938 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 FAM237AA0A1B0GTK4 181 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 HNRNPDLO14979 420 aaKnown RBP21.24■□□□□ 0.99
GTF3A-201ENST00000381140 PRPF40AO75400 957 aaKnown RBP21.24■□□□□ 0.99
GTF3A-201ENST00000381140 PBX3P40426 434 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 AFF1P51825 1210 aaKnown RBP21.24■□□□□ 0.99
GTF3A-201ENST00000381140 OSTNP61366 133 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 CUL4BQ13620 913 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 ADGRE1Q14246 886 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 MPZL3Q6UWV2 235 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 ZNF720Q7Z2F6 126 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 COLGALT1Q8NBJ5 622 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 SLC17A8Q8NDX2 589 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 UBN1Q9NPG3 1134 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 AAASQ9NRG9 546 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 TBC1D13Q9NVG8 400 aa21.24■□□□□ 0.99
GTF3A-201ENST00000381140 PRRC2BQ5JSZ5 2229 aaKnown RBP21.24■□□□□ 0.99
GTF3A-201ENST00000381140 FRMD3A2A2Y4 597 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 ARL5CA6NH57 179 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 ZC3H11AO75152 810 aaKnown RBP eCLIP21.23■□□□□ 0.99
GTF3A-201ENST00000381140 MYBP10242 640 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 LAG3P18627 525 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 CASP5P51878 434 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 GTF2BQ00403 316 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 ZPBP2Q6X784 338 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 THNSL1Q8IYQ7 743 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 MICALL1Q8N3F8 863 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 CEP120Q8N960 986 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 FGFBP2Q9BYJ0 223 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 PCDHB12Q9Y5F1 795 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 MYO7AQ13402 2215 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 TOM1L1O75674 476 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 RECQL4O94761 1208 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 ZNF202O95125 648 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 SCP2P22307 547 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 SCNN1GP51170 649 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 KLHL23Q8NBE8 558 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 ZNF558Q96NG5 402 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 FAM193BQ96PV7 902 aaPredicted RBP21.23■□□□□ 0.99
GTF3A-201ENST00000381140 RPS6KC1Q96S38 1066 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 C11orf84Q9BUA3 381 aaPredicted RBP21.23■□□□□ 0.99
GTF3A-201ENST00000381140 PTPRHQ9HD43 1115 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 OLFML3Q9NRN5 406 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 GIT1Q9Y2X7 761 aa21.23■□□□□ 0.99
GTF3A-201ENST00000381140 H3BNC9 293 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 CLDN3O15551 220 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 GTPBP6O43824 516 aaPredicted RBP21.22■□□□□ 0.99
GTF3A-201ENST00000381140 RB1P06400 928 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 MCF2P10911 925 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 ABCD1P33897 745 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 NOLC1Q14978 699 aaKnown RBP eCLIP21.22■□□□□ 0.99
GTF3A-201ENST00000381140 SEZ6Q53EL9 994 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 KRBA2Q6ZNG9 492 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 UNC13DQ70J99 1090 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 MAP4K3Q8IVH8 894 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 CCDC94Q9BW85 323 aaPredicted RBP21.22■□□□□ 0.99
GTF3A-201ENST00000381140 IKZF4Q9H2S9 585 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 ST6GALNAC4Q9H4F1 302 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 NRDE2Q9H7Z3 1164 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 ALG13Q9NP73 1137 aaKnown RBP21.22■□□□□ 0.99
GTF3A-201ENST00000381140 MIOSQ9NXC5 875 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 KANSL3Q9P2N6 904 aa21.22■□□□□ 0.99
GTF3A-201ENST00000381140 PDCD11Q14690 1871 aaKnown RBP21.21■□□□□ 0.99
GTF3A-201ENST00000381140 NT5C1B-RDH14C9J2C7 533 aa21.21■□□□□ 0.99
GTF3A-201ENST00000381140 C5orf67F2Z3F1 127 aa21.21■□□□□ 0.99
GTF3A-201ENST00000381140 ABLIM1O14639 778 aa21.21■□□□□ 0.99
GTF3A-201ENST00000381140 LPXNO60711 386 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms