RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SCP2P22307 547 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 TTLL4Q14679 1199 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 MICALL1Q8N3F8 863 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 OTUD6BQ8N6M0 293 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
CDX2-201ENST00000381020 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 FEZ2Q9UHY8 353 aaPredicted RBP13.41□□□□□ -0.26
CDX2-201ENST00000381020 PASKQ96RG2 1323 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 PPP3CAQ08209 521 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 ANKRD42Q8N9B4 389 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 C1orf54Q8WWF1 131 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
CDX2-201ENST00000381020 NOD1Q9Y239 953 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 PLAAQ9Y263 795 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 IGSF9BQ9UPX0 1349 aa13.41□□□□□ -0.26
CDX2-201ENST00000381020 SYNJ2BP-COX16A0A087WUM0 186 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 GRID2IPA4D2P6 1211 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ANKRD63C9JTQ0 380 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 DDX3XO00571 662 aaKnown RBP eCLIP13.4□□□□□ -0.26
CDX2-201ENST00000381020 OATP04181 439 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 C4BP0C0L5 1744 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 P4HA1P13674 534 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 CCT5P48643 541 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 CYP4F22Q6NT55 531 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 CCDC60Q8IWA6 550 aaPredicted RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 C7orf43Q8WVR3 580 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 FAM167AQ96KS9 214 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 FAM114A2Q9NRY5 505 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 COX16Q9P0S2 106 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 L1RE1Q9UN81 338 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 LTBP4Q8N2S1 1624 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TLR2O60603 784 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 CALCAP01258 141 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 POLR2BP30876 1174 aaKnown RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 TMEM62Q0P6H9 643 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 LY6KQ17RY6 165 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 GLE1Q53GS7 698 aaKnown RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 ZNF667Q5HYK9 610 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 C9orf131Q5VYM1 1079 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ANKRD13AQ8IZ07 590 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 SH2D3CQ8N5H7 860 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 EXOC4Q96A65 974 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 FAM118BQ9BPY3 351 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 KLHL11Q9NVR0 708 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 LRRIQ3A6PVS8 624 aaPredicted RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 ECEL1O95672 775 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 KRT14P02533 472 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 PRKCBP05771 671 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 PTGER2P43116 358 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 KCNJ1P48048 391 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 IFNAR2P48551 515 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 YWHAEP62258 255 aaKnown RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 PDCLQ13371 301 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 SLC47A2Q86VL8 602 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ERICH1Q86X53 443 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 FBXO16Q8IX29 292 aaPredicted RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TATDN2Q93075 761 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 ZBTB45Q96K62 511 aaPredicted RBP13.4□□□□□ -0.26
CDX2-201ENST00000381020 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TMEM117Q9H0C3 514 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
CDX2-201ENST00000381020 RTN2O75298 545 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 RNF8O76064 485 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 MMEP08473 750 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 ATF2P15336 505 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 COMTP21964 271 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 NCOA4Q13772 614 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 VGLL4Q14135 290 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CLUL1Q15846 466 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CCDC89Q8N998 374 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 CHST13Q8NET6 341 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 VPS37BQ9H9H4 285 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 PARP2Q9UGN5 583 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 NFKBIEO00221 500 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 XRRA1Q6P2D8 792 aa13.39□□□□□ -0.27
CDX2-201ENST00000381020 PRPF31Q8WWY3 499 aaKnown RBP13.39□□□□□ -0.27
CDX2-201ENST00000381020 GPRC5DQ9NZD1 345 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms