RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 KIAA0391O15091 583 aaKnown RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CYP26A1O43174 497 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CYP1A2P05177 515 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CTNNA2P26232 953 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PTGIRP43119 386 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PEX5P50542 639 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 SEC24CP53992 1094 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 DMP1Q13316 513 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PLA2G4FQ68DD2 849 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 HOOK3Q86VS8 718 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 MAP4K3Q8IVH8 894 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NIM1KQ8IY84 436 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 MICALL1Q8N3F8 863 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PRELID2Q8N945 189 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TMEM161BQ8NDZ6 487 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 C18orf8Q96DM3 657 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 ZBED3Q96IU2 234 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 RMDN3Q96TC7 470 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TMEM8AQ9HCN3 771 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PXMP2Q9NR77 195 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PODXLO00592 558 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 WNT10BO00744 389 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 ATMINO43313 823 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CCNE2O96020 404 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 MMEP08473 750 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NUDT17P0C025 328 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CNGA1P29973 690 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 ADSSP30520 456 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NPTX2P47972 431 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 LIG3P49916 1009 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PDE6CP51160 858 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 GPC3P51654 580 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PLTPP55058 493 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 FMO1Q01740 532 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NBPF9Q3BBW0 867 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TRMT1LQ7Z2T5 733 aaKnown RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 USP37Q86T82 979 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PACS2Q86VP3 889 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 C3orf20Q8ND61 904 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 ZNF564Q8TBZ8 553 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TMC2Q8TDI7 906 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PARD3BQ8TEW8 1205 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 SEMA4DQ92854 862 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CD101Q93033 1021 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 RUNDC3BQ96NL0 473 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NT5C1BQ96P26 610 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PDCD2LQ9BRP1 358 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 NUP85Q9BW27 656 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PPANQ9NQ55 473 aaKnown RBP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIM23-203ENST00000381018 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 GTF3C4Q9UKN8 822 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 SNX24Q9Y343 169 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 COQ4Q9Y3A0 265 aa12.82□□□□□ -0.36
TRIM23-203ENST00000381018 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 DENND3A2RUS2 1198 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 MEFVO15553 781 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 SPOPO43791 374 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ATP9AO75110 1047 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ZBED4O75132 1171 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 CYP11B1P15538 503 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 GTF2H1P32780 548 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 CDR1P51861 262 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 PMS2P54278 862 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 MAGOHP61326 146 aaKnown RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ARHGEF16Q5VV41 709 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ZNF772Q68DY9 489 aaPredicted RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ZDHHC24Q6UX98 284 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 RNF207Q6ZRF8 634 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 FBXL13Q8NEE6 735 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 KIFAP3Q92845 792 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 ZNF653Q96CK0 615 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
TRIM23-203ENST00000381018 KMT5AQ9NQR1 393 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 GINM1Q9NU53 330 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 STK32BQ9NY57 414 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 UVRAGQ9P2Y5 699 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 GGA2Q9UJY4 613 aa12.81□□□□□ -0.36
TRIM23-203ENST00000381018 GMNCA6NCL1 334 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 TRAPPC3O43617 180 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 PAEPP09466 180 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 CDR2Q01850 454 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 DENND2CQ68D51 928 aa12.8□□□□□ -0.36
TRIM23-203ENST00000381018 CCDC137Q6PK04 289 aaKnown RBP12.8□□□□□ -0.36
TRIM23-203ENST00000381018 OTUD6AQ7L8S5 288 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms