RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ARF4P18085 180 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 AXLP30530 894 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 HOXA11P31270 313 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 STAT6P42226 847 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 ME1P48163 572 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 RAB27AP51159 221 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 MAPK7Q13164 816 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 DMP1Q13316 513 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 PCBP1Q15365 356 aaKnown RBP eCLIP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 MAPK6Q16659 721 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 PUS10Q3MIT2 529 aaKnown RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 EPC2Q52LR7 807 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 UBXN11Q5T124 520 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 CDCA2Q69YH5 1023 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 ZNF598Q86UK7 904 aaKnown RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 CDR2LQ86X02 465 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 TMEM192Q8IY95 271 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 HELQQ8TDG4 1101 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 KCNG4Q8TDN1 519 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 LRRC15Q8TF66 581 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 GDPD5Q8WTR4 605 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 LARP4BQ92615 738 aaKnown RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 LPPQ93052 612 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 CCDC51Q96ER9 411 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 CHAMP1Q96JM3 812 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 APOL6Q9BWW8 343 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 TMEM117Q9H0C3 514 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 ZHX3Q9H4I2 956 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 KMT5AQ9NQR1 393 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 PRMT7Q9NVM4 692 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 KCND2Q9NZV8 630 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 USP20Q9Y2K6 914 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 PCDHB2Q9Y5E7 798 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 C5orf42Q9H799 3197 aa10.18□□□□□ -0.78
HMGN1-202ENST00000380747 COL4A4P53420 1690 aaPredicted RBP10.18□□□□□ -0.78
HMGN1-202ENST00000380747 K7ERI5 159 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 SLC16A4O15374 487 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 CUTAO60888 179 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 FAM13AO94988 1023 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 NPTXRO95502 500 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 PLS3P13797 630 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 ATF7P17544 494 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 DDIT3P35638 169 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 NPTX2P47972 431 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 EFNA5P52803 228 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 GPM6BQ13491 265 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 PRPF4BQ13523 1007 aaKnown RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 ARSHQ5FYA8 562 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 CLLU1OSQ5K130 101 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 NOTUMQ6P988 496 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 GLB1LQ6UWU2 654 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 CCDC73Q6ZRK6 1079 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 PDILTQ8N807 584 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 PGBD4Q96DM1 585 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 PRIMPOLQ96LW4 560 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 TRAIPQ9BWF2 469 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 EIF2AQ9BY44 585 aaKnown RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 TRIM6Q9C030 488 aaPredicted RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 FZD8Q9H461 694 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 RNF19AQ9NV58 838 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 TYW1Q9NV66 732 aaKnown RBP10.17□□□□□ -0.78
HMGN1-202ENST00000380747 STK17AQ9UEE5 414 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 INPP5FQ9Y2H2 1132 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 RWDD3Q9Y3V2 267 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 ATP6V1DQ9Y5K8 247 aa10.17□□□□□ -0.78
HMGN1-202ENST00000380747 COL4A6Q14031 1691 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 ZNF318Q5VUA4 2279 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 A0A087X0B3 334 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 MEIS3P2A8K0S8 358 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 ACKR2O00590 384 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 ZNF623O75123 536 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 TBCAO75347 108 aaKnown RBP10.16□□□□□ -0.78
HMGN1-202ENST00000380747 ITGA4P13612 1032 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 BMPR1AP36894 532 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 MRE11P49959 708 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SMTNP53814 917 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 KRT85P78386 507 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 NUCB2P80303 420 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 COL19A1Q14993 1142 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 FAM187BQ17R55 369 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SLC27A1Q6PCB7 646 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SV2BQ7L1I2 683 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 DYMQ7RTS9 669 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 LRRC43Q8N309 656 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 MYCT1Q8N699 235 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 CNNM3Q8NE01 707 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SPIRE2Q8WWL2 714 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 DHX58Q96C10 678 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 SPATA32Q96LK8 384 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 REEP2Q9BRK0 252 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 CCDC113Q9H0I3 377 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 C17orf75Q9HAS0 396 aa10.16□□□□□ -0.78
HMGN1-202ENST00000380747 AAASQ9NRG9 546 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms