RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
SMN2-201ENST00000380741 AKAP5P24588 427 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 AVPR2P30518 371 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 SLC27A1Q6PCB7 646 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 HACE1Q8IYU2 909 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 RNF168Q8IYW5 571 aaPredicted RBP18.7■□□□□ 0.58
SMN2-201ENST00000380741 GSTCDQ8NEC7 633 aa18.7■□□□□ 0.58
SMN2-201ENST00000380741 A0A1B0GUA9 196 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 LRRIQ4A6NIV6 560 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 NPTXRO95502 500 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 GLUD2P49448 558 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 SAFBQ15424 915 aaKnown RBP eCLIP18.69■□□□□ 0.58
SMN2-201ENST00000380741 KIAA0319Q5VV43 1072 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 CCDC149Q6ZUS6 474 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 PLCD3Q8N3E9 789 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 TUFT1Q9NNX1 390 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 MAN1C1Q9NR34 630 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 SSX2IPQ9Y2D8 614 aa18.69■□□□□ 0.58
SMN2-201ENST00000380741 TEX28O15482 410 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 EIF5BO60841 1220 aaKnown RBP18.68■□□□□ 0.58
SMN2-201ENST00000380741 NR1I2O75469 434 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 ADH1AP07327 375 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 ERICH6BQ5W0A0 696 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 CDCA2Q69YH5 1023 aaPredicted RBP18.68■□□□□ 0.58
SMN2-201ENST00000380741 POTEGQ6S5H5 508 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 CCDC83Q8IWF9 413 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 MCPH1Q8NEM0 835 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 C8orf76Q96K31 380 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 POLR3CQ9BUI4 534 aaPredicted RBP18.68■□□□□ 0.58
SMN2-201ENST00000380741 KLK14Q9P0G3 267 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 MTCL1Q9Y4B5 1905 aaKnown RBP18.68■□□□□ 0.58
SMN2-201ENST00000380741 DMDP11532 3685 aa18.68■□□□□ 0.58
SMN2-201ENST00000380741 DSG1Q02413 1049 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 GRIK3Q13003 919 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 ZNF174Q15697 407 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 C15orf39Q6ZRI6 1047 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 OTOP3Q7RTS5 596 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 ACSF2Q96CM8 615 aaPredicted RBP18.67■□□□□ 0.58
SMN2-201ENST00000380741 PRIMPOLQ96LW4 560 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 NACC1Q96RE7 527 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 COLEC11Q9BWP8 271 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 RXFP1Q9HBX9 757 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 CHST7Q9NS84 486 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 PRMT7Q9NVM4 692 aaPredicted RBP18.67■□□□□ 0.58
SMN2-201ENST00000380741 PARP2Q9UGN5 583 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 ZMYM2Q9UBW7 1377 aa18.67■□□□□ 0.58
SMN2-201ENST00000380741 TTLL13PA6NNM8 815 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 GLUD1P00367 558 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 OR52Z1P0C646 297 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 MYBP10242 640 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 RPA1P27694 616 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 FUT10Q6P4F1 479 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 ZBTB8OSQ8IWT0 167 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 CMASQ8NFW8 434 aaPredicted RBP18.66■□□□□ 0.58
SMN2-201ENST00000380741 BSNDQ8WZ55 320 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 RABGGTAQ92696 567 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 GPR62Q9BZJ7 368 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
SMN2-201ENST00000380741 FZD8Q9H461 694 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 CACNG4Q9UBN1 327 aa18.66■□□□□ 0.58
SMN2-201ENST00000380741 RFPL2O75678 378 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 ORC2Q13416 577 aaPredicted RBP18.65■□□□□ 0.58
SMN2-201ENST00000380741 FAM187BQ17R55 369 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 PADI6Q6TGC4 694 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 ERMNQ8TAM6 284 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 LLPHQ9BRT6 129 aaKnown RBP18.65■□□□□ 0.58
SMN2-201ENST00000380741 PDZD7Q9H5P4 517 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 ADAM28Q9UKQ2 775 aa18.65■□□□□ 0.58
SMN2-201ENST00000380741 DOCK8Q8NF50 2099 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 CCDC195A0A1B0GUA6 201 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 USP41Q3LFD5 358 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 ELMSAN1Q6PJG2 1045 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 FBXO18Q8NFZ0 1043 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 PAAF1Q9BRP4 392 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 C2orf40Q9H1Z8 148 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 FAM86C1Q9NVL1 165 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 DPP7Q9UHL4 492 aa18.64■□□□□ 0.57
SMN2-201ENST00000380741 VPS13AQ96RL7 3174 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 ARHGEF35A5YM69 484 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 N4BP3O15049 544 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
SMN2-201ENST00000380741 EDN1P05305 212 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 CYP11B2P19099 503 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 PRPF4BQ13523 1007 aaKnown RBP18.63■□□□□ 0.57
SMN2-201ENST00000380741 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
SMN2-201ENST00000380741 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 GLYCTKQ8IVS8 523 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 TMEM105Q8N8V8 129 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 RIN2Q8WYP3 895 aaPredicted RBP18.63■□□□□ 0.57
SMN2-201ENST00000380741 RHOBTB2Q9BYZ6 727 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 KCNK12Q9HB15 430 aa18.63■□□□□ 0.57
SMN2-201ENST00000380741 WDR6Q9NNW5 1121 aaKnown RBP18.63■□□□□ 0.57
SMN2-201ENST00000380741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms