RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 LVRNQ6Q4G3 990 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 LRRC6Q86X45 466 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 TAB3Q8N5C8 712 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 SPATA5Q8NB90 893 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 DGCR14Q96DF8 476 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 TRMT112Q9UI30 125 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 GMEB1Q9Y692 573 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 WASF2Q9Y6W5 498 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 DLG5Q8TDM6 1919 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 PLEKHG3A1L390 1219 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CYP11B2P19099 503 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 MX2P20592 715 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 NEK3P51956 506 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 NR1H3Q13133 447 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CTTNQ14247 550 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 GALNTL6Q49A17 601 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 RBM46Q8TBY0 533 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 SYN2Q92777 582 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 NAALADL1Q9UQQ1 740 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 USP20Q9Y2K6 914 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 NEURL4Q96JN8 1562 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CCNB1P14635 433 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 SLC9A1P19634 815 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 HIC1Q14526 733 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 PTF1AQ7RTS3 328 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 KRT25Q7Z3Z0 450 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 SLF2Q8IX21 1173 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 LCORLQ8N3X6 602 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 BAP1Q92560 729 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 OSBPL8Q9BZF1 889 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 IFT122Q9HBG6 1241 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 PALMDQ9NP74 551 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 UTYO14607 1347 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 XPO1O14980 1071 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 STAT4Q14765 748 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 ACSBG2Q5FVE4 666 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 ZNF571Q7Z3V5 609 aaPredicted RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 TRIM59Q8IWR1 403 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CNBD2Q96M20 576 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 TRIM56Q9BRZ2 755 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 NUF2Q9BZD4 464 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CRNKL1Q9BZJ0 848 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 XAB2Q9HCS7 855 aaKnown RBP11.63□□□□□ -0.55
USP6NL-202ENST00000379237 APPL1Q9UKG1 709 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 CHKBQ9Y259 395 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 MIF4GDA9UHW6 222 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 ASMTLO95671 621 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 MRPS9P82933 396 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 CCSER1Q9C0I3 900 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 PRDM16Q9HAZ2 1276 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 STX18Q9P2W9 335 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 RSPH10B2B2RC85 870 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 CALUO43852 315 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 CIAO1O76071 339 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 USP1O94782 785 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 RSPH10BP0C881 870 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 UCHL3P15374 230 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 HPCAP84074 193 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 RABL6Q3YEC7 729 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 DUPD1Q68J44 220 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 IP6K1Q92551 441 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 TRIM11Q96F44 468 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 TSSK1BQ9BXA7 367 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 PFASO15067 1338 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 BOLA2-SMG1P6H3BVE0 249 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 LAD1O00515 517 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 KIAA0391O15091 583 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 NOP14P78316 857 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 ATP1A4Q13733 1029 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 RINLQ6ZS11 566 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 ZSCAN29Q8IWY8 852 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 PROM2Q8N271 834 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 KCNH5Q8NCM2 988 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 BBOF1Q8ND07 529 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 GIPC3Q8TF64 312 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 DHX36Q9H2U1 1008 aaKnown RBP11.62□□□□□ -0.55
USP6NL-202ENST00000379237 LRRC4CQ9HCJ2 640 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 PCDH18Q9HCL0 1135 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 EURLQ9NYK6 297 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 MST1RQ04912 1400 aa11.62□□□□□ -0.55
USP6NL-202ENST00000379237 FRMPD1Q5SYB0 1578 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 PCCAP05165 728 aaPredicted RBP11.61□□□□□ -0.55
USP6NL-202ENST00000379237 ANPEPP15144 967 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 FUT4P22083 530 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 NFKBIAP25963 317 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 NAA20P61599 178 aa11.61□□□□□ -0.55
USP6NL-202ENST00000379237 CCDC15Q0P6D6 951 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms