RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 BFARQ9NZS9 450 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 CAPN7Q9Y6W3 813 aa11.61□□□□□ -0.55
LINC00654-201ENST00000379053 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 BARGINQ6ZT62 677 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 DCP1BQ8IZD4 617 aaKnown RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 MAML1Q92585 1016 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CCDC138Q96M89 665 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 MYO1DO94832 1006 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CDC25BP30305 580 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 TMEM132DQ14C87 1099 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 ARHGAP15Q53QZ3 475 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 TBC1D19Q8N5T2 526 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CCDC197Q8NCU1 140 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 GOLGA8MH3BSY2 632 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM49P0CI25 452 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM49CP0CI26 452 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CCT5P48643 541 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 ZNF746Q6NUN9 644 aaPredicted RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 ENOSF1Q7L5Y1 443 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CDKL3Q8IVW4 592 aaPredicted RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 ZNF564Q8TBZ8 553 aaPredicted RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 NUP85Q9BW27 656 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 COPEO14579 308 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CTNND1O60716 968 aaKnown RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CLTAP09496 248 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CASP1P29466 404 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 AMPD2Q01433 879 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 SF3B3Q15393 1217 aaKnown RBP11.6□□□□□ -0.55
LINC00654-201ENST00000379053 SYTL3Q4VX76 610 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 SH2D3AQ9BRG2 576 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 CASS4Q9NQ75 786 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 SFMBT1Q9UHJ3 866 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
LINC00654-201ENST00000379053 POLRMTO00411 1230 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TPI1P60174 286 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ANKRD40Q6AI12 368 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 VSTM4Q8IW00 320 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CHST13Q8NET6 341 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 RGL1Q9NZL6 768 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 NYAP2Q9P242 653 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 EYA4O95677 639 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 LRG1P02750 347 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 SULT1E1P49888 294 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 WASHC5Q12768 1159 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 DRAP1Q14919 205 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 MB21D2Q8IYB1 491 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ZMYND12Q9H0C1 365 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 EMSYQ7Z589 1322 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 SYNGAP1Q96PV0 1343 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 MAGI3Q5TCQ9 1506 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 C2CD2LO14523 706 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ADCK2Q7Z695 626 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CCNYL1Q8N7R7 359 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 MUC3BQ9H195 1237 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 VCPP55072 806 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ZNF543Q08ER8 600 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ERAP1Q9NZ08 941 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 PRG3Q9Y2Y8 225 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 WDR19Q8NEZ3 1342 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ABCC3O15438 1527 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 KPNA7A9QM74 516 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 SERPIND1P05546 499 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CDH6P55285 790 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 FOXO4P98177 505 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TRIM72Q6ZMU5 477 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 ANKS3Q6ZW76 656 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TRMT10CQ7L0Y3 403 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 KDELC2Q7Z4H8 507 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 AGBL3Q8NEM8 1001 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 TTC7AQ9ULT0 858 aaPredicted RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 DIS3Q9Y2L1 958 aaKnown RBP11.59□□□□□ -0.55
LINC00654-201ENST00000379053 PNPLA7Q6ZV29 1317 aa11.59□□□□□ -0.55
LINC00654-201ENST00000379053 CCDC151A5D8V7 595 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 PP2D1A8MPX8 630 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 PIK3R2O00459 728 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 KIAA0391O15091 583 aaKnown RBP11.58□□□□□ -0.55
LINC00654-201ENST00000379053 AKT1P31749 480 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 ROR1Q01973 937 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 AP1ARQ63HQ0 302 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 PID1Q7Z2X4 250 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 CLEC10AQ8IUN9 316 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.55
LINC00654-201ENST00000379053 RAPGEF5Q92565 580 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 TTC17Q96AE7 1141 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 SUFUQ9UMX1 484 aa11.58□□□□□ -0.55
LINC00654-201ENST00000379053 CA12O43570 354 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms