RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 PTPN4P29074 926 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SNRPFP62306 86 aaKnown RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 PTP4A2Q12974 167 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 ALCAMQ13740 583 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 CTTNQ14247 550 aaKnown RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 SPARCL1Q14515 664 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SMC1BQ8NDV3 1235 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SH3RF3Q8TEJ3 882 aaPredicted RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 FAM81BQ96LP2 452 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 LRRC37BQ96QE4 947 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 CCDC113Q9H0I3 377 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 DMAC2Q9NW81 257 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 FETUBQ9UGM5 382 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SCOCQ9UIL1 159 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 STK38LQ9Y2H1 464 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SLC4A7Q9Y6M7 1214 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SPATA31A5Q5VU36 1347 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SPATA31A6Q5VVP1 1343 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SPATA31A7Q8IWB4 1347 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 IGKV6D-41A0A0C4DH26 115 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 TESPA1A2RU30 521 aaPredicted RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 SMIM24O75264 130 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 CYP1A2P05177 515 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 FGFR4P22455 802 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 RPS6KA3P51812 740 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 RAD23BP54727 409 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 INHBEP58166 350 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 KPNB1Q14974 876 aaKnown RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 TCERG1LQ5VWI1 586 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 HS2ST1Q7LGA3 356 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SFR1Q86XK3 245 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 ECHDC2Q86YB7 292 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 SPICE1Q8N0Z3 855 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 NR1H4Q96RI1 486 aaPredicted RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 FGFBP2Q9BYJ0 223 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 INTS2Q9H0H0 1204 aaKnown RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 LRRC4CQ9HCJ2 640 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 KCNK9Q9NPC2 374 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 EURLQ9NYK6 297 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 DBR1Q9UK59 544 aaKnown RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 FRMD4BQ9Y2L6 1034 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 RBBP6Q7Z6E9 1792 aaKnown RBP8.77□□□□□ -1
PTPRR-203ENST00000378778 COL4A1P02462 1669 aa8.77□□□□□ -1
PTPRR-203ENST00000378778 GREB1LQ9C091 1923 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 POTECB2RU33 542 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ZBTB5O15062 677 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 MARK3P27448 753 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 HOXD13P35453 343 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF543Q08ER8 600 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 SIX1Q15475 284 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 FAM91A1Q658Y4 838 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TBC1D9BQ66K14 1250 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TTC27Q6P3X3 843 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TEKT4Q8WW24 435 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 PRCCQ92733 491 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 NUDCD1Q96RS6 583 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 YIPF3Q9GZM5 350 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 MTFR1LQ9H019 292 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 IL1RAPL1Q9NZN1 696 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TBC1D7Q9P0N9 293 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 WDR35Q9P2L0 1181 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 XIRP1Q702N8 1843 aaKnown RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 POTEB3A0JP26 581 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 C2CD2LO14523 706 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 EXOC3O60645 756 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ZBED4O75132 1171 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ATP5BP06576 529 aaKnown RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 SLC1A1P43005 524 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 CLCN2P51788 898 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 MYL7Q01449 175 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 EVX2Q03828 476 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 MOGSQ13724 837 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 PDK4Q16654 411 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 POTEBQ6S5H4 581 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 RNF207Q6ZRF8 634 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 BRINP3Q76B58 766 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ARHGAP24Q8N264 748 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 DRAXINQ8NBI3 349 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 FAM13CQ8NE31 585 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 UTP4Q969X6 686 aaKnown RBP8.77□□□□□ -1.01
PTPRR-203ENST00000378778 ARHGEF26Q96DR7 871 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 CFAP57Q96MR6 1250 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 REEP2Q9BRK0 252 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TIPINQ9BVW5 301 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 GPR88Q9GZN0 384 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 THAP2Q9H0W7 228 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 PSTPIP2Q9H939 334 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 TUFT1Q9NNX1 390 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 MTMR4Q9NYA4 1195 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 RGL1Q9NZL6 768 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 DNAJB4Q9UDY4 337 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 GTF3C4Q9UKN8 822 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 SRCAPQ6ZRS2 3230 aa8.77□□□□□ -1.01
PTPRR-203ENST00000378778 IGSF9BQ9UPX0 1349 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 DPPA5A6NC42 116 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MAGEA13PA6NCF6 341 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SMIM23A6NLE4 172 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms