RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SLC30A5Q8TAD4 765 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 PABPC5Q96DU9 382 aaKnown RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 CDC23Q9UJX2 597 aa17.28■□□□□ 0.36
RGP1-201ENST00000378078 MRPL42Q9Y6G3 142 aaKnown RBP17.28■□□□□ 0.36
RGP1-201ENST00000378078 SDC4P31431 198 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
RGP1-201ENST00000378078 CYTH1Q15438 398 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 DTNAQ9Y4J8 743 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 WDR62O43379 1518 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 TPI1P60174 286 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 E2F4Q16254 413 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 ADGRF4Q8IZF3 695 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 ZNF614Q8N883 585 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 ZNF564Q8TBZ8 553 aaPredicted RBP17.27■□□□□ 0.36
RGP1-201ENST00000378078 NR1D1P20393 614 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 RASGRF1Q13972 1273 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 C17orf80Q9BSJ5 609 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 ENTPD7Q9NQZ7 604 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 CD274Q9NZQ7 290 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 DYNC1LI2O43237 492 aaPredicted RBP17.27■□□□□ 0.36
RGP1-201ENST00000378078 CPA5Q8WXQ8 436 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
RGP1-201ENST00000378078 MAGEB5Q9BZ81 275 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 PALMDQ9NP74 551 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 ZNF229Q9UJW7 825 aa17.27■□□□□ 0.36
RGP1-201ENST00000378078 GUCY2CP25092 1073 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 HIBCHQ6NVY1 386 aaPredicted RBP17.27■□□□□ 0.35
RGP1-201ENST00000378078 RNF149Q8NC42 400 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 MRPL4Q9BYD3 311 aaKnown RBP17.27■□□□□ 0.35
RGP1-201ENST00000378078 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.35
RGP1-201ENST00000378078 SLC25A13Q9UJS0 675 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 KPNA7A9QM74 516 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 AVPR1AP37288 418 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 CDH6P55285 790 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 APPL2Q8NEU8 664 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 JADE3Q92613 823 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 KIFC3Q9BVG8 833 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 PARD3Q8TEW0 1356 aa17.27■□□□□ 0.35
RGP1-201ENST00000378078 APOL1O14791 398 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 HOXB7P09629 217 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 ASZ1Q8WWH4 475 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 PNKPQ96T60 521 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 DGKIO75912 1065 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 ST13P4Q8IZP2 240 aaPredicted RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 FAM136AQ96C01 138 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 MCM8Q9UJA3 840 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 IKBKBO14920 756 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 ASNSP08243 561 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 MRPL28Q13084 256 aaKnown RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 ARHGEF7Q14155 803 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 LRRC37BQ96QE4 947 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 DDX28Q9NUL7 540 aaKnown RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 RRP15Q9Y3B9 282 aaKnown RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 NR3C1P04150 777 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 PRDX5P30044 214 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 SPATS2Q86XZ4 545 aaKnown RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 CYGBQ8WWM9 190 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 PIGBQ92521 554 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 FGFR4P22455 802 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 NCALDP61601 193 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 SLC44A2Q8IWA5 706 aaPredicted RBP17.26■□□□□ 0.35
RGP1-201ENST00000378078 SLC9A2Q9UBY0 812 aa17.26■□□□□ 0.35
RGP1-201ENST00000378078 NDUFA10O95299 355 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 FSCBQ5H9T9 825 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 WDR75Q8IWA0 830 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 CEP95Q96GE4 821 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 TRIM33Q9UPN9 1127 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ACOT2P49753 483 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 THAP9Q9H5L6 903 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 GCFC2P16383 781 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 PRR23D1E9PI22 279 aaPredicted RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 ENO1P06733 434 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 PRR23D2P0DMB1 279 aaPredicted RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 TXNP10599 105 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 NAALADL2Q58DX5 795 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 KHDRBS2Q5VWX1 349 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 FBXO18Q8NFZ0 1043 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 HES6Q96HZ4 224 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 LXNQ9BS40 222 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ARHGEF9O43307 516 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 CTIFO43310 598 aaKnown RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 SLC39A14Q15043 492 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ICA1LQ8NDH6 482 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 OTUB1Q96FW1 271 aaPredicted RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 SHCBP1LQ9BZQ2 653 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 N6AMT1Q9Y5N5 214 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 GABPB1Q06547 395 aaPredicted RBP17.25■□□□□ 0.35
RGP1-201ENST00000378078 RAD51Q06609 339 aa17.25■□□□□ 0.35
RGP1-201ENST00000378078 ZRANB3Q5FWF4 1079 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms