RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 DBF4BQ8NFT6 615 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 CCDC51Q96ER9 411 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 HSD3B7Q9H2F3 369 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 CEP290O15078 2479 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 TRIP11Q15643 1979 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 HARSP12081 509 aaKnown RBP23.26■■□□□ 1.31
CBWD3-202ENST00000377342 CSF2RAP15509 400 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 SPATA1Q5VX52 437 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 LUZP1Q86V48 1076 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 SAAL1Q96ER3 474 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 MSTO1Q9BUK6 570 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 CHST12Q9NRB3 414 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 NFE2L3Q9Y4A8 694 aa23.26■■□□□ 1.31
CBWD3-202ENST00000377342 PDCD11Q14690 1871 aaKnown RBP23.26■■□□□ 1.31
CBWD3-202ENST00000377342 IKBKBO14920 756 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 NPTXRO95502 500 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 MCF2P10911 925 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 CASP4P49662 377 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 NCBP1Q09161 790 aaKnown RBP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 TCHPQ9BT92 498 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 AGO2Q9UKV8 859 aaKnown RBP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 PTPRSQ13332 1948 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 SYN1P17600 705 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 MATR3P43243 847 aaKnown RBP eCLIP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 FKBP3Q00688 224 aaKnown RBP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 MYBPC2Q14324 1141 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 DCAF4L1Q3SXM0 396 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 SEZ6Q53EL9 994 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 TWF2Q6IBS0 349 aaKnown RBP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 RTN4RL1Q86UN2 441 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-202ENST00000377342 SEPT8Q92599 483 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 FBXL18Q96ME1 805 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 PRKAG2Q9UGJ0 569 aa23.25■■□□□ 1.31
CBWD3-202ENST00000377342 GOLGA8IPA6NC78 632 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 GOLGA8JA6NMD2 632 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 AKAP3O75969 853 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 ADAM9Q13443 819 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 CRELD2Q6UXH1 353 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-202ENST00000377342 IRF2BP1Q8IU81 584 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 TMEM199Q8N511 208 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 XXYLT1Q8NBI6 393 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 RNF214Q8ND24 703 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 BADQ92934 168 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 ADAM2Q99965 735 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 ADPGKQ9BRR6 497 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 TRAIPQ9BWF2 469 aa23.24■■□□□ 1.31
CBWD3-202ENST00000377342 SRRTQ9BXP5 876 aaKnown RBP23.24■■□□□ 1.31
CBWD3-202ENST00000377342 NXF3Q9H4D5 531 aaKnown RBP23.24■■□□□ 1.31
CBWD3-202ENST00000377342 SAMSN1Q9NSI8 373 aaKnown RBP23.24■■□□□ 1.31
CBWD3-202ENST00000377342 ZMYND8Q9ULU4 1186 aaPredicted RBP23.24■■□□□ 1.31
CBWD3-202ENST00000377342 OGTO15294 1046 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 ADRB2P07550 413 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 TNFSF9P41273 254 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 CBWD2Q8IUF1 395 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 TMEM192Q8IY95 271 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 GPD1LQ8N335 351 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 APBB2Q92870 758 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 CEP63Q96MT8 703 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 RBSNQ9H1K0 784 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 TSPYL2Q9H2G4 693 aaPredicted RBP23.23■■□□□ 1.31
CBWD3-202ENST00000377342 FANCLQ9NW38 375 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 TTC3P53804 2025 aa23.23■■□□□ 1.31
CBWD3-202ENST00000377342 KIAA0391O15091 583 aaKnown RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 MEFVO15553 781 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 RPL13P26373 211 aaKnown RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 ACOT2P49753 483 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 CDKAL1Q5VV42 579 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 CEP135Q66GS9 1140 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 SMG8Q8ND04 991 aaKnown RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 DPF3Q92784 378 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 FAM213AQ9BRX8 229 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 FTHL17Q9BXU8 183 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 FAM105AQ9NUU6 356 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 HES2Q9Y543 173 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 TNRC18O15417 2968 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 CETN3O15182 167 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 EXTL3O43909 919 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 EXOC3O60645 756 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 ZSCAN20P17040 1043 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 ATF7P17544 494 aaPredicted RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 HSP90AA4PQ58FG1 418 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 CNKSR3Q6P9H4 555 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 THNSL1Q8IYQ7 743 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 THAP9Q9H5L6 903 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 RGS18Q9NS28 235 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 CPSF3Q9UKF6 684 aaKnown RBP23.22■■□□□ 1.31
CBWD3-202ENST00000377342 IPPQ9Y573 584 aa23.22■■□□□ 1.31
CBWD3-202ENST00000377342 ZNF18P17022 549 aa23.21■■□□□ 1.31
CBWD3-202ENST00000377342 GRM5P41594 1212 aa23.21■■□□□ 1.31
CBWD3-202ENST00000377342 SNRNP35Q16560 246 aaKnown RBP23.21■■□□□ 1.31
CBWD3-202ENST00000377342 TPD52L1Q16890 204 aaPredicted RBP23.21■■□□□ 1.31
CBWD3-202ENST00000377342 PCDHB2Q9Y5E7 798 aa23.21■■□□□ 1.31
CBWD3-202ENST00000377342 C9IYK1 514 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 SLC16A3O15427 465 aaKnown RBP23.2■■□□□ 1.3
CBWD3-202ENST00000377342 ACRP10323 421 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 WNT7BP56706 349 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 OSTNP61366 133 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 FILIP1Q7Z7B0 1213 aa23.2■■□□□ 1.3
CBWD3-202ENST00000377342 NOC3LQ8WTT2 800 aaKnown RBP23.2■■□□□ 1.3
CBWD3-202ENST00000377342 BORCS6Q96GS4 357 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms