RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TMEM247A6NEH6 219 aa14.47□□□□□ -0.09
GPC6-201ENST00000377047 EIF3BP55884 814 aaKnown RBP14.47□□□□□ -0.09
GPC6-201ENST00000377047 TADA2BQ86TJ2 420 aa14.47□□□□□ -0.09
GPC6-201ENST00000377047 PARD6BQ9BYG5 372 aa14.47□□□□□ -0.09
GPC6-201ENST00000377047 PLEKHA5Q9HAU0 1116 aa14.47□□□□□ -0.09
GPC6-201ENST00000377047 PRRG1O14668 218 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 FCGRTP55899 365 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 PRAMEP78395 509 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 RBP5P82980 135 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 PRKCEQ02156 737 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 PDIA5Q14554 519 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 PLA2G4FQ68DD2 849 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 GTSE1Q9NYZ3 720 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 SMARCA1P28370 1054 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 CDH6P55285 790 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 POU5F1BQ06416 359 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 ARID5BQ14865 1188 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 FAM133BQ5BKY9 247 aaKnown RBP14.46□□□□□ -0.09
GPC6-201ENST00000377047 NEXMIFQ5QGS0 1516 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 FRMD5Q7Z6J6 570 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 CDKL3Q8IVW4 592 aaPredicted RBP14.46□□□□□ -0.09
GPC6-201ENST00000377047 HPS3Q969F9 1004 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 ULK4Q96C45 1275 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 SEPT5Q99719 369 aaPredicted RBP14.46□□□□□ -0.09
GPC6-201ENST00000377047 FOXN1O15353 648 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 CYP26A1O43174 497 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 ALDH1A1P00352 501 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 PDHBP11177 359 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 DGKDQ16760 1214 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 SHC4Q6S5L8 630 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 SLC7A5P2Q9GIP4 190 aa14.46□□□□□ -0.09
GPC6-201ENST00000377047 RASA1P20936 1047 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.1
GPC6-201ENST00000377047 CRLF3Q8IUI8 442 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.1
GPC6-201ENST00000377047 AGBL1Q96MI9 1066 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 EGFL8Q99944 293 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 ZNF609O15014 1411 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 MAGEB2O15479 319 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 IRF1P10914 325 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 PHEXP78562 749 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 PDE1CQ14123 709 aaPredicted RBP14.46□□□□□ -0.1
GPC6-201ENST00000377047 SUN2Q9UH99 717 aa14.46□□□□□ -0.1
GPC6-201ENST00000377047 LSM7Q9UK45 103 aaKnown RBP14.46□□□□□ -0.1
GPC6-201ENST00000377047 MYO3AQ8NEV4 1616 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 UBE2Q2LH0YL09 131 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 CPT1AP50416 773 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 TMPRSS15P98073 1019 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 GNASQ5JWF2 1037 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 EFHD1Q9BUP0 239 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 MED14O60244 1454 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 DNAJC6O75061 913 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 KRT38O76015 456 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 PDGFRBP09619 1106 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 MX2P20592 715 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 GPS1Q13098 491 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 ZBTB41Q5SVQ8 909 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 KDELC2Q7Z4H8 507 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 CHST13Q8NET6 341 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 SLC16A10Q8TF71 515 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 RAPGEF5Q92565 580 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 APOL1O14791 398 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 NCK2O43639 380 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 INPP1P49441 399 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 RGS7P49802 495 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 EFCAB12Q6NXP0 572 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 FBXO33Q7Z6M2 555 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 SH3TC2Q8TF17 1288 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 ZKSCAN4Q969J2 545 aaPredicted RBP14.45□□□□□ -0.1
GPC6-201ENST00000377047 ATG4CQ96DT6 458 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 PHF20Q9BVI0 1012 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 DRC3Q9H069 523 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 E9PCH4 1651 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 CYP2C9P11712 490 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 ALS2CLQ60I27 953 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 LRRC71Q8N4P6 559 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 AGBL3Q8NEM8 1001 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 KRT82Q9NSB4 513 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 PLAAQ9Y263 795 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 STXBP3O00186 592 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 TPI1P60174 286 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 ANKRD40Q6AI12 368 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 REEP2Q9BRK0 252 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 PCDHB7Q9Y5E2 793 aa14.45□□□□□ -0.1
GPC6-201ENST00000377047 SETBP1Q9Y6X0 1596 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 PDXKO00764 312 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 KIAA0391O15091 583 aaKnown RBP14.44□□□□□ -0.1
GPC6-201ENST00000377047 OR1G1P47890 313 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 TAP1Q03518 808 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 PGBD3Q8N328 593 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 MRPL46Q9H2W6 279 aaKnown RBP14.44□□□□□ -0.1
GPC6-201ENST00000377047 SPECC1L-ADORA2AF8WAN1 911 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 GTF2A2P52657 109 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 COPS2P61201 443 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
GPC6-201ENST00000377047 ZFXP17010 805 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms