RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CAPN6Q9Y6Q1 641 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 ZNF233A6NK53 670 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 TNPO2O14787 897 aaKnown RBP13.66□□□□□ -0.22
CLCN6-206ENST00000376496 MSCO60682 206 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 SNRPFP62306 86 aaKnown RBP13.66□□□□□ -0.22
CLCN6-206ENST00000376496 TMEM62Q0P6H9 643 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 KIF5AQ12840 1032 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 SV2AQ7L0J3 742 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 PPM1KQ8N3J5 372 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
CLCN6-206ENST00000376496 NUCKS1Q9H1E3 243 aaKnown RBP13.66□□□□□ -0.22
CLCN6-206ENST00000376496 SSU72P8A0A1W2PR75 194 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TMCO5BA8MYB1 307 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 H0YCG3 227 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 EXTL3O43909 919 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 PRKCBP05771 671 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TNNI1P19237 187 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 BEX3Q00994 111 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 CEP120Q8N960 986 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TMEM174Q8WUU8 243 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TATDN2Q93075 761 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 SETD4Q9NVD3 440 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 AKT3Q9Y243 479 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 KRT86O43790 486 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TBC1D8O95759 1140 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 SOX5P35711 763 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 TCP11Q8WWU5 503 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 DHX38Q92620 1227 aaKnown RBP13.65□□□□□ -0.22
CLCN6-206ENST00000376496 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 RBAKQ9NYW8 714 aaPredicted RBP13.65□□□□□ -0.22
CLCN6-206ENST00000376496 GINS2Q9Y248 185 aa13.65□□□□□ -0.22
CLCN6-206ENST00000376496 MYH10P35580 1976 aa13.65□□□□□ -0.23
CLCN6-206ENST00000376496 A0A087WZ62 844 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 A0A0B4J269 797 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 KIF3CO14782 793 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SRGAP2O75044 1071 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 AOC2O75106 756 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 PPFIA4O75335 1185 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SLU7O95391 586 aaKnown RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 LCA5LO95447 670 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 ATP1A1P05023 1023 aaKnown RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 STAT1P42224 750 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SLC26A2P50443 739 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 CAP1Q01518 475 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SLC18A3Q16572 532 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 KRT39Q6A163 491 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 PALB2Q86YC2 1186 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 KREMEN1Q96MU8 473 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 ZFYVE28Q9HCC9 887 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 CLDN3O15551 220 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 CLSTN1O94985 981 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 ZNF865P0CJ78 1059 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 FGFR4P22455 802 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 MXD4Q14582 209 aaPredicted RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 MAPK6Q16659 721 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 PTPROQ16827 1216 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 THNSL1Q8IYQ7 743 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SLC20A1Q8WUM9 679 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 ARID3AQ99856 593 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 EPC1Q9H2F5 836 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 TMEM134Q9H6X4 195 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SEPT11Q9NVA2 429 aaKnown RBP13.64□□□□□ -0.23
CLCN6-206ENST00000376496 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 STYXL1Q9Y6J8 313 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 SIP14410 1827 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 CEP350Q5VT06 3117 aa13.64□□□□□ -0.23
CLCN6-206ENST00000376496 CTAGE9A4FU28 777 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 DDX3XO00571 662 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 MAPK13O15264 365 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 CTIFO43310 598 aaKnown RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 NAP1L1P55209 391 aaKnown RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 CETN1Q12798 172 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 PPFIA1Q13136 1202 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 OR5B17Q8NGF7 314 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 OLIG1Q8TAK6 271 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 U2AF1L4Q8WU68 220 aaKnown RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 FNBP1Q96RU3 617 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 FAM49AQ9H0Q0 323 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 PUF60Q9UHX1 559 aaKnown RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 FBXL5Q9UKA1 691 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 HTTP42858 3142 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 TUBB4AP04350 444 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 BIRC3Q13489 604 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 KIAA0753Q2KHM9 967 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 CDCA2Q69YH5 1023 aaPredicted RBP13.63□□□□□ -0.23
CLCN6-206ENST00000376496 IQSEC1Q6DN90 963 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 TLK2Q86UE8 772 aa13.63□□□□□ -0.23
CLCN6-206ENST00000376496 TMEM192Q8IY95 271 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms