RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SPOCK3Q9BQ16 436 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CHCHD3Q9NX63 227 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 DNM3Q9UQ16 869 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 GPR75-ASB3A0A0A6YYF3 556 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 IPO5O00410 1097 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 FTLP02792 175 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CYP2J2P51589 502 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ZNF131P52739 623 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 SNX1Q13596 522 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 SIX1Q15475 284 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ZNF568Q3ZCX4 644 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 TRIM68Q6AZZ1 485 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ECHDC2Q86YB7 292 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ARMC2Q8NEN0 867 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CYP2W1Q8TAV3 490 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 INTS2Q9H0H0 1204 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 FRMPD4Q14CM0 1322 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 MAP3K13O43283 966 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 CHRNB2P17787 502 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 RRP1BQ14684 758 aaKnown RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 TRIP13Q15645 432 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 SHROOM1Q2M3G4 852 aaPredicted RBP12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 MFSD5Q6N075 450 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 TMEM237Q96Q45 408 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 ARL2BPQ9Y2Y0 163 aa12.33□□□□□ -0.44
TM9SF2-201ENST00000376387 SPATA31A1Q5TZJ5 1347 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 RPL13P26373 211 aaKnown RBP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 IRX1P78414 480 aaPredicted RBP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 C1orf54Q8WWF1 131 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 RXFP1Q9HBX9 757 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 ZBTB5O15062 677 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 DLATP10515 647 aaKnown RBP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 FOXN2P32314 431 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 PPP2R5EQ16537 467 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 C11orf91Q3C1V1 193 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 ETNK1Q9HBU6 452 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 KLF15Q9UIH9 416 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 ITM2BQ9Y287 266 aa12.32□□□□□ -0.44
TM9SF2-201ENST00000376387 FAM86B1E9PN63 330 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 EML1O00423 815 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 PODXLO00592 558 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 LDHCP07864 332 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 FAM86B2P0C5J1 330 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 TUBP50607 506 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 BLMHQ13867 455 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 TAF11Q15544 211 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 KYNUQ16719 465 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 ZBTB10Q96DT7 871 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 DNAJC18Q9H819 358 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 TAF1LQ8IZX4 1826 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 BRAFP15056 766 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 GM2AP17900 193 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 DLG4P78352 724 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 THEMIS2Q5TEJ8 643 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 PMM1Q92871 262 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 KAT5Q92993 513 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 PCDHB18PQ96TA0 734 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 RGL2O15211 777 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 RPA1P27694 616 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 QRICH1Q2TAL8 776 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 ARHGEF19Q8IW93 802 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 UBL4BQ8N7F7 174 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 ATG4AQ8WYN0 398 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 LENG9Q96B70 501 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 TRIM11Q96F44 468 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 STMN4Q9H169 189 aaPredicted RBP12.31□□□□□ -0.44
TM9SF2-201ENST00000376387 IGKV6D-41A0A0C4DH26 115 aa12.3□□□□□ -0.44
TM9SF2-201ENST00000376387 TBCAO75347 108 aaKnown RBP12.3□□□□□ -0.44
TM9SF2-201ENST00000376387 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
TM9SF2-201ENST00000376387 RPUSD2Q8IZ73 545 aaKnown RBP12.3□□□□□ -0.44
TM9SF2-201ENST00000376387 MYCT1Q8N699 235 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms