RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CCDC172P0C7W6 258 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 TNNT1P13805 278 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 FERP16591 822 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
PDPN-202ENST00000376057 DLG4P78352 724 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 SP3Q02447 781 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 PRAMEF19Q5SWL8 479 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 NME8Q8N427 588 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 HAUS4Q9H6D7 363 aa12.07□□□□□ -0.48
PDPN-202ENST00000376057 ZEB2O60315 1214 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CST5P28325 142 aaPredicted RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 HOXD10P28358 340 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MFSD10Q14728 455 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 ENOSF1Q7L5Y1 443 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 LRRC71Q8N4P6 559 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRPV1Q8NER1 839 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CCDC42Q96M95 316 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TARS2Q9BW92 718 aaKnown RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 TSGA10Q9BZW7 698 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 SAGE1Q9NXZ1 904 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 REXO2Q9Y3B8 237 aaKnown RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 OGTO15294 1046 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CLDN3O15551 220 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 PJA2O43164 708 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 EDN1P05305 212 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRIM49P0CI25 452 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRIM49CP0CI26 452 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 STAT1P42224 750 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 PSEN2P49810 448 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MXI1P50539 228 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 AMHR2Q16671 573 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 IQCEQ6IPM2 695 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 BRSK2Q8IWQ3 736 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 KIAA0319LQ8IZA0 1049 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 ZSWIM2Q8NEG5 633 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRAPPC12Q8WVT3 735 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 FAXDC2Q96IV6 333 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MAP7D2Q96T17 732 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MSTO1Q9BUK6 570 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRMT1Q9NXH9 659 aaKnown RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 SEPT4O43236 478 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 MCF2P10911 925 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 GNAT1P11488 350 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 PRMT2P55345 433 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 ASIC2Q16515 512 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 FSCN1Q16658 493 aaKnown RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 SESTD1Q86VW0 696 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 TRIB2Q92519 343 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 SAAL1Q96ER3 474 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CGRRF1Q99675 332 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 ADAMTS10Q9H324 1103 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 CPSF3Q9UKF6 684 aaKnown RBP12.06□□□□□ -0.48
PDPN-202ENST00000376057 FHOD1Q9Y613 1164 aa12.06□□□□□ -0.48
PDPN-202ENST00000376057 BTNL10A8MVZ5 291 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 C4BPAP04003 597 aaKnown RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 SRGAP2CP0DJJ0 459 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 ACTN1P12814 892 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 SOX5P35711 763 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 ARHGAP25P42331 645 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 FLT3LGP49771 235 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 CLCN3P51790 818 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 PURAQ00577 322 aaKnown RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 PRPF4BQ13523 1007 aaKnown RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 ZACNQ401N2 412 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 NFRKBQ6P4R8 1299 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 FBXL13Q8NEE6 735 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 KIF18AQ8NI77 898 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 PXYLP1Q8TE99 480 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 LMBR1Q8WVP7 490 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 GPR88Q9GZN0 384 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 F8VZ95 297 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 AOC2O75106 756 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 IPO7O95373 1038 aaKnown RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 MAP3K21Q5TCX8 1036 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 ATF7IP2Q5U623 682 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 RPAINQ86UA6 219 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 WDR49Q8IV35 697 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 METTL13Q8N6R0 699 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 C16orf45Q96MC5 204 aaPredicted RBP12.05□□□□□ -0.48
PDPN-202ENST00000376057 DNAJC12Q9UKB3 198 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 GABRQQ9UN88 632 aa12.05□□□□□ -0.48
PDPN-202ENST00000376057 GOLGA8IPA6NC78 632 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 IL18RAPO95256 599 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 EIF4A3P38919 411 aaKnown RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 KIF11P52732 1056 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 VAV2P52735 878 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 NLRP11P59045 1033 aaKnown RBP12.04□□□□□ -0.48
PDPN-202ENST00000376057 GCNT1Q02742 428 aa12.04□□□□□ -0.48
PDPN-202ENST00000376057 TUBB2AQ13885 445 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms