RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SEPT9Q9UHD8 586 aaPredicted RBP15.08■□□□□ 0
MSH5-202ENST00000375740 MCM8Q9UJA3 840 aa15.08■□□□□ 0
MSH5-202ENST00000375740 PPP2R3BQ9Y5P8 575 aa15.08■□□□□ 0
MSH5-202ENST00000375740 CEP104O60308 925 aa15.07■□□□□ 0
MSH5-202ENST00000375740 PEX10O60683 326 aa15.07■□□□□ 0
MSH5-202ENST00000375740 KIAA0754O94854 1291 aa15.07■□□□□ 0
MSH5-202ENST00000375740 GLI1P08151 1106 aa15.07■□□□□ 0
MSH5-202ENST00000375740 RNF187Q5TA31 235 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 GPC2Q8N158 579 aa15.07■□□□□ 0
MSH5-202ENST00000375740 METTL13Q8N6R0 699 aa15.07■□□□□ 0
MSH5-202ENST00000375740 SLC20A1Q8WUM9 679 aa15.07■□□□□ 0
MSH5-202ENST00000375740 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
MSH5-202ENST00000375740 IGSF9BQ9UPX0 1349 aa15.07■□□□□ 0
MSH5-202ENST00000375740 GOLGA8KD6RF30 607 aa15.07■□□□□ 0
MSH5-202ENST00000375740 ZBTB48P10074 688 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 ELF1P32519 619 aa15.07■□□□□ 0
MSH5-202ENST00000375740 MCCD1P59942 119 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 SKOR1P84550 965 aa15.07■□□□□ 0
MSH5-202ENST00000375740 PRKCEQ02156 737 aa15.07■□□□□ 0
MSH5-202ENST00000375740 FSTL1Q12841 308 aa15.07■□□□□ 0
MSH5-202ENST00000375740 GNPTABQ3T906 1256 aa15.07■□□□□ 0
MSH5-202ENST00000375740 NAA35Q5VZE5 725 aa15.07■□□□□ 0
MSH5-202ENST00000375740 SLC39A4Q6P5W5 647 aa15.07■□□□□ 0
MSH5-202ENST00000375740 NT5DC3Q86UY8 548 aa15.07■□□□□ 0
MSH5-202ENST00000375740 KIRREL3Q8IZU9 778 aa15.07■□□□□ 0
MSH5-202ENST00000375740 SYCE1Q8N0S2 351 aa15.07■□□□□ 0
MSH5-202ENST00000375740 CTNNBL1Q8WYA6 563 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 N4BP2L2Q92802 583 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 C17orf75Q9HAS0 396 aa15.07■□□□□ 0
MSH5-202ENST00000375740 XPNPEP1Q9NQW7 623 aa15.07■□□□□ 0
MSH5-202ENST00000375740 CYP26B1Q9NR63 512 aa15.07■□□□□ 0
MSH5-202ENST00000375740 KLC4Q9NSK0 619 aa15.07■□□□□ 0
MSH5-202ENST00000375740 SUCLA2Q9P2R7 463 aaPredicted RBP15.07■□□□□ 0
MSH5-202ENST00000375740 NCANO14594 1321 aa15.06■□□□□ 0
MSH5-202ENST00000375740 ADGRA3Q8IWK6 1321 aa15.06■□□□□ 0
MSH5-202ENST00000375740 PMM2O15305 246 aa15.06■□□□□ 0
MSH5-202ENST00000375740 STAM2O75886 525 aa15.06■□□□□ 0
MSH5-202ENST00000375740 DGAT1O75907 488 aa15.06■□□□□ 0
MSH5-202ENST00000375740 SH3D19Q5HYK7 790 aa15.06■□□□□ 0
MSH5-202ENST00000375740 PARD3BQ8TEW8 1205 aa15.06■□□□□ 0
MSH5-202ENST00000375740 RFFLQ8WZ73 363 aa15.06■□□□□ 0
MSH5-202ENST00000375740 SEMA4DQ92854 862 aa15.06■□□□□ 0
MSH5-202ENST00000375740 VTI1AQ96AJ9 217 aa15.06■□□□□ 0
MSH5-202ENST00000375740 MIEF2Q96C03 454 aa15.06■□□□□ 0
MSH5-202ENST00000375740 ARHGEF26Q96DR7 871 aa15.06■□□□□ 0
MSH5-202ENST00000375740 ZIM3Q96PE6 472 aa15.06■□□□□ 0
MSH5-202ENST00000375740 THAP2Q9H0W7 228 aa15.06■□□□□ 0
MSH5-202ENST00000375740 TMEM59LQ9UK28 342 aa15.06■□□□□ 0
MSH5-202ENST00000375740 CHUKO15111 745 aa15.06■□□□□ 0
MSH5-202ENST00000375740 BUB1BO60566 1050 aaPredicted RBP15.06■□□□□ 0
MSH5-202ENST00000375740 CNTN2Q02246 1040 aa15.06■□□□□ 0
MSH5-202ENST00000375740 SPRED3Q2MJR0 410 aa15.06■□□□□ 0
MSH5-202ENST00000375740 MIS18BP1Q6P0N0 1132 aa15.06■□□□□ 0
MSH5-202ENST00000375740 B4GALNT4Q76KP1 1039 aa15.06■□□□□ 0
MSH5-202ENST00000375740 KLHL7Q8IXQ5 586 aa15.06■□□□□ 0
MSH5-202ENST00000375740 IFT20Q8IY31 132 aa15.06■□□□□ 0
MSH5-202ENST00000375740 ACTRT1Q8TDG2 376 aa15.06■□□□□ 0
MSH5-202ENST00000375740 EPB41L5Q9HCM4 733 aa15.06■□□□□ 0
MSH5-202ENST00000375740 ARID2Q68CP9 1835 aa15.05■□□□□ 0
MSH5-202ENST00000375740 MYPNQ86TC9 1320 aa15.05■□□□□ 0
MSH5-202ENST00000375740 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ 0
MSH5-202ENST00000375740 HEXIM1O94992 359 aaKnown RBP15.05■□□□□ 0
MSH5-202ENST00000375740 LSP1P33241 339 aa15.05■□□□□ 0
MSH5-202ENST00000375740 GUCY2DQ02846 1103 aa15.05■□□□□ 0
MSH5-202ENST00000375740 NNTQ13423 1086 aa15.05■□□□□ 0
MSH5-202ENST00000375740 NEDD9Q14511 834 aa15.05■□□□□ 0
MSH5-202ENST00000375740 STXBP2Q15833 593 aa15.05■□□□□ 0
MSH5-202ENST00000375740 MTERF2Q49AM1 385 aa15.05■□□□□ 0
MSH5-202ENST00000375740 TREML2Q5T2D2 321 aa15.05■□□□□ 0
MSH5-202ENST00000375740 MCPH1Q8NEM0 835 aa15.05■□□□□ 0
MSH5-202ENST00000375740 SCFD2Q8WU76 684 aa15.05■□□□□ 0
MSH5-202ENST00000375740 POMGNT1Q8WZA1 660 aa15.05■□□□□ 0
MSH5-202ENST00000375740 GDF3Q9NR23 364 aa15.05■□□□□ 0
MSH5-202ENST00000375740 USP20Q9Y2K6 914 aa15.05■□□□□ 0
MSH5-202ENST00000375740 SNCAIPQ9Y6H5 919 aa15.05■□□□□ 0
MSH5-202ENST00000375740 ANKRD62A6NC57 917 aa15.05■□□□□ -0
MSH5-202ENST00000375740 SGPL1O95470 568 aa15.05■□□□□ -0
MSH5-202ENST00000375740 SUPT20HL2P0C7V6 817 aa15.05■□□□□ -0
MSH5-202ENST00000375740 TNFRSF8P28908 595 aa15.05■□□□□ -0
MSH5-202ENST00000375740 PPATQ06203 517 aa15.05■□□□□ -0
MSH5-202ENST00000375740 IFT88Q13099 833 aa15.05■□□□□ -0
MSH5-202ENST00000375740 VGLL4Q14135 290 aa15.05■□□□□ -0
MSH5-202ENST00000375740 PREPLQ4J6C6 727 aaPredicted RBP15.05■□□□□ -0
MSH5-202ENST00000375740 KRT39Q6A163 491 aa15.05■□□□□ -0
MSH5-202ENST00000375740 CYFIP1Q7L576 1253 aa15.05■□□□□ -0
MSH5-202ENST00000375740 RPAINQ86UA6 219 aa15.05■□□□□ -0
MSH5-202ENST00000375740 RPUSD2Q8IZ73 545 aaKnown RBP15.05■□□□□ -0
MSH5-202ENST00000375740 ANKRD35Q8N283 1001 aa15.05■□□□□ -0
MSH5-202ENST00000375740 PPM1KQ8N3J5 372 aa15.05■□□□□ -0
MSH5-202ENST00000375740 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
MSH5-202ENST00000375740 HES6Q96HZ4 224 aa15.05■□□□□ -0
MSH5-202ENST00000375740 MFSD14AQ96MC6 490 aa15.05■□□□□ -0
MSH5-202ENST00000375740 KREMEN1Q96MU8 473 aa15.05■□□□□ -0
MSH5-202ENST00000375740 ATP6V0A4Q9HBG4 840 aa15.05■□□□□ -0
MSH5-202ENST00000375740 TOPORSQ9NS56 1045 aaPredicted RBP15.05■□□□□ -0
MSH5-202ENST00000375740 AMFRQ9UKV5 643 aa15.05■□□□□ -0
MSH5-202ENST00000375740 LCTP09848 1927 aa15.04■□□□□ -0
MSH5-202ENST00000375740 RASSF9O75901 435 aa15.04■□□□□ -0
MSH5-202ENST00000375740 ATP4AP20648 1035 aa15.04■□□□□ -0
MSH5-202ENST00000375740 PAX7P23759 505 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms