RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 EFL1Q7Z2Z2 1120 aaKnown RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 OTUB1Q96FW1 271 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 OSBPL11Q9BXB4 747 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 FRMD8P1Q9BZ68 369 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 MAGEB5Q9BZ81 275 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 NDST4Q9H3R1 872 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SENP3Q9H4L4 574 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 C12orf4Q9NQ89 552 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 KDRP35968 1356 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 KPNA3O00505 521 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 SERPINB9P50453 376 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 OSBPL6Q9BZF3 934 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TAGLN3Q9UI15 199 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 MKLN1Q9UL63 735 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PHF2O75151 1096 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 MOCS3O95396 460 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 FLT3P36888 993 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 KDSRQ06136 332 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PLS1Q14651 629 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 KRT31Q15323 416 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 LRRC6Q86X45 466 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TDRD5Q8NAT2 981 aaKnown RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 MAP4K1Q92918 833 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 IL1RL1Q01638 556 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 WDR24Q96S15 920 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SP100P23497 879 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 GJC1P36383 396 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 GABPAQ06546 454 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 SLC15A2Q16348 729 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 CD302Q8IX05 232 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TTC30BQ8N4P2 665 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 ERP44Q9BS26 406 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PAGR1Q9BTK6 254 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 CCSER2Q9H7U1 834 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 MINK1Q8N4C8 1332 aaPredicted RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 TRIM13O60858 407 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 NR1I3Q14994 352 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 LRRC74BQ6ZQY2 392 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TRAPPC11Q7Z392 1133 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 PLCG1P19174 1290 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 CSNK2BP67870 215 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 TNFAIP8L3Q5GJ75 292 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 GALNT4Q8N4A0 578 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 MDM1Q8TC05 714 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 RORBQ92753 470 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 MRPL48Q96GC5 212 aaKnown RBP6.98□□□□□ -1.29
UBR4-204ENST00000375254 ZNF652Q9Y2D9 606 aa6.98□□□□□ -1.29
UBR4-204ENST00000375254 A0A0G2JPF8 293 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 HNRNPCL3B7ZW38 293 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 F8W810 466 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 HNRNPCL4P0DMR1 293 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 RFC5P40937 340 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 TRIQKQ629K1 86 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 KCTD6Q8NC69 237 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 DNAAF2Q9NVR5 837 aaKnown RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 GRID1Q9ULK0 1009 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 MAP3K1Q13233 1512 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 BTN3A3O00478 584 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ZNF263O14978 683 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 NLRC4Q9NPP4 1024 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 PI4KAP2A4QPH2 592 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 USP1O94782 785 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 RFX1P22670 979 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 RCVRNP35243 200 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ENPEPQ07075 957 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 SLC5A9Q2M3M2 681 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 EXOC3L1Q86VI1 746 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 PI4KAP1Q8N8J0 262 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 CLHC1Q8NHS4 586 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 DNAJC11Q9NVH1 559 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 SNX24Q9Y343 169 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 TRPC5OSA6NMA1 111 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 PRIM2P49643 509 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 KRT17Q04695 432 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 TRAP1Q12931 704 aaKnown RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 PAPD7Q5XG87 772 aaKnown RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 PIK3AP1Q6ZUJ8 805 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 H7C0C1 242 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ATP5OP48047 213 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 CCT8P50990 548 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 SLC45A4Q5BKX6 768 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ZNF530Q6P9A1 599 aaPredicted RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 GET4Q7L5D6 327 aaPredicted RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 MEIS3Q99687 375 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 SYTL2Q9HCH5 934 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ST7Q9NRC1 585 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ASAP1Q9ULH1 1129 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 ATP6V1G1O75348 118 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 HADHAP40939 763 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 NAALADL2Q58DX5 795 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 KIAA1755Q5JYT7 1200 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 LDHAL6AQ6ZMR3 332 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 HAUS6Q7Z4H7 955 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 CAPSLQ8WWF8 208 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 HAND2P61296 217 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 PARP6Q2NL67 630 aa6.97□□□□□ -1.29
UBR4-204ENST00000375254 C11orf57Q6ZUT1 292 aaPredicted RBP6.97□□□□□ -1.29
UBR4-204ENST00000375254 KIF2BQ8N4N8 673 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms