RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 IQCB1Q15051 598 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PTPN21Q16825 1174 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KIZQ2M2Z5 673 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SWSAP1Q6NVH7 229 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C4orf19Q8IY42 314 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KIAA0319LQ8IZA0 1049 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 NME8Q8N427 588 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 OSMRQ99650 979 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BHMT2Q9H2M3 363 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CWH43Q9H720 699 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 RGS18Q9NS28 235 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C1orf112Q9NSG2 853 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 EXOC1Q9NV70 894 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 WRAP73Q9P2S5 460 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CDH22Q9UJ99 828 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DBR1Q9UK59 544 aaKnown RBP12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PLXNA3P51805 1871 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 COL1A2P08123 1366 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 WDR81Q562E7 1941 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 IGKV6D-21A0A0A0MT36 114 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZBTB42B2RXF5 422 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PPP1R3GB7ZBB8 358 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 IKBKBO14920 756 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZBTB39O15060 712 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C22orf31O95567 290 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PDGFBP01127 241 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 IDEP14735 1019 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 LAG3P18627 525 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ERCC5P28715 1186 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PBX3P40426 434 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SLC26A2P50443 739 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FAM160B1Q5W0V3 765 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 RINT1Q6NUQ1 792 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SLC24A5Q71RS6 500 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZBTB33Q86T24 672 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 LUZP1Q86V48 1076 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DHX40Q8IX18 779 aaKnown RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CCDC65Q8IXS2 484 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ANP32BQ92688 251 aaKnown RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DNAJC19Q96DA6 116 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SNX27Q96L92 541 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TCF25Q9BQ70 676 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ENTPD7Q9NQZ7 604 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZNF302Q9NR11 478 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ANKEF1Q9NU02 776 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PANK4Q9NVE7 773 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KCND2Q9NZV8 630 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 GABBR1Q9UBS5 961 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
HLA-DQA1-202ENST00000374949 NPHP3-ACAD11A0A0J9YXS1 232 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ARHGEF35A5YM69 484 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 HBP1O60381 514 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 VTNP04004 478 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SRGAP2BP0DMP2 458 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 YWHABP31946 246 aaKnown RBP12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PPP1R2P41236 205 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TPM4P67936 248 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 STIM1Q13586 685 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 GIT2Q14161 759 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ANKRD54Q6NXT1 300 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SYCE2Q6PIF2 218 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C1orf186Q6ZWK4 172 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PRRX2Q99811 253 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 S1PR5Q9H228 398 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TMEM161AQ9NX61 479 aa12.03□□□□□ -0.48
HLA-DQA1-202ENST00000374949 GPR182O15218 404 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GFRA3O60609 400 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ATP4AP20648 1035 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CLCN3P51790 818 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CRYBB1P53674 252 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 MYL5Q02045 173 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 KCNC3Q14003 757 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 DSC3Q14574 896 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 UGCGQ16739 394 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 COBLL1Q53SF7 1204 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ZNF484Q5JVG2 852 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ODR4Q5SWX8 454 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 PDE12Q6L8Q7 609 aaKnown RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LRRC55Q6ZSA7 311 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 SMYD4Q8IYR2 804 aaPredicted RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ADSSL1Q8N142 457 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LRRC43Q8N309 656 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 CCDC43Q96MW1 224 aaKnown RBP12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RUSC1Q9BVN2 902 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 NRBP2Q9NSY0 501 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 RNF19AQ9NV58 838 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 LZTS1Q9Y250 596 aa12.02□□□□□ -0.49
HLA-DQA1-202ENST00000374949 GDAQ9Y2T3 454 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms