RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 L3MBTL1Q9Y468 752 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ATICP31939 592 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 PCYT1AP49585 367 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 DRP2Q13474 957 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 GRAMD1AQ96CP6 724 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 NOC2LQ9Y3T9 749 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 RASSF10A6NK89 507 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 E9PMD0 336 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 PMLP29590 882 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SALL1Q9NSC2 1324 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 FAM187AA6NFU0 413 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 E2F6O75461 281 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 IL1R1P14778 569 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 MMP14P50281 582 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 TFDP2Q14188 446 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 PADI6Q6TGC4 694 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 DCTN4Q9UJW0 460 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 POTECB2RU33 542 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 K7ERI5 159 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 FDPSP14324 419 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 PAMP19021 973 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SOX5P35711 763 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 EPHB1P54762 984 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ILDR1Q86SU0 546 aaPredicted RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 RUBCNQ92622 972 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 NCLNQ969V3 563 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 HEXIM2Q96MH2 286 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SLITRK6Q9H5Y7 841 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ATP6V0A4Q9HBG4 840 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SENP2Q9HC62 589 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 ABT1Q9ULW3 272 aaKnown RBP13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
NPLOC4-202ENST00000374747 GMPSP49915 693 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 HMGCS2P54868 508 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 NOP14P78316 857 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 COG2Q14746 738 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ZDHHC15Q96MV8 337 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 POLRMTO00411 1230 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 PEX3P56589 373 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 TGFB2P61812 414 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 MTMR2Q13614 643 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ARL13BQ3SXY8 428 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 STAMBPL1Q96FJ0 436 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 DDX47Q9H0S4 455 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 COPS2P61201 443 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 NUDCD3Q8IVD9 361 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 HEMGNQ9BXL5 484 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 EPC1Q9H2F5 836 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SLIT3O75094 1523 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 RNF103-CHMP3A0A140T963 221 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 STXBP3O00186 592 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 PRCPP42785 496 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 PAPOLAP51003 745 aaKnown RBP13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ARMCX2Q7L311 632 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SRLQ86TD4 932 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 SFR1Q86XK3 245 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 ZNF280CQ8ND82 737 aa13.03□□□□□ -0.32
NPLOC4-202ENST00000374747 PLSCR1O15162 318 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 NCK2O43639 380 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 TROAPQ12815 778 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 COASYQ13057 564 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 CDC26Q8NHZ8 85 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 EXT2Q93063 718 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 NBPF3Q9H094 633 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 KITP10721 976 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 EPHA7Q15375 998 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 CDO1Q16878 200 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 TKFCQ3LXA3 575 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 TXNRD3Q86VQ6 643 aa13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 SCG3Q8WXD2 468 aaKnown RBP13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 NGRNQ9NPE2 291 aaKnown RBP13.02□□□□□ -0.32
NPLOC4-202ENST00000374747 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms