RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 DYMQ7RTS9 669 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SEPT8Q92599 483 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SNX27Q96L92 541 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 EDEM3Q9BZQ6 932 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GDAQ9Y2T3 454 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MEFVO15553 781 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 AARSP49588 968 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ANKRD40Q6AI12 368 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PSRC1Q6PGN9 363 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 INTS8Q75QN2 995 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RHPN2Q8IUC4 686 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LRRC71Q8N4P6 559 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TMEM199Q8N511 208 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CDT1Q9H211 546 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CDHR5Q9HBB8 845 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 A0A1W2PQC6 194 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC16A4O15374 487 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 KRT18P05783 430 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RFX1P22670 979 aa12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SMG8Q8ND04 991 aaKnown RBP12.2□□□□□ -0.46
CSGALNACT2-201ENST00000374466 N4BP1O75113 896 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NR3C1P04150 777 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 WDR49Q8IV35 697 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 XXYLT1Q8NBI6 393 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PLIN2Q99541 437 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TTC3P53804 2025 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 C1orf220Q5T0J3 134 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RNF168Q8IYW5 571 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PGBD4Q96DM1 585 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 AKT3Q9Y243 479 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GCNT3O95395 438 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ATF7P17544 494 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SP4Q02446 784 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CYP24A1Q07973 514 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PAK2Q13177 524 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MEA1Q16626 185 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 COL13A1Q5TAT6 717 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 C11orf57Q6ZUT1 292 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC24A5Q71RS6 500 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 OXCT2Q9BYC2 517 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ANKRD63C9JTQ0 380 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PSMC2P35998 433 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CMTR2Q8IYT2 770 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CGRRF1Q99675 332 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 HSPBP1Q9NZL4 362 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PADI3Q9ULW8 664 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ST3GAL5Q9UNP4 418 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GBF1Q92538 1859 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 VTNP04004 478 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 DSC1Q08554 894 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RTN4RL1Q86UN2 441 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ECHDC2Q86YB7 292 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PPP1R10Q96QC0 940 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 AGO3Q9H9G7 860 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TMEM265A0A087WTH1 108 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 FECHP22830 423 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PMS1P54277 932 aaKnown RBP12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 USP37Q86T82 979 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 SLC9A7Q96T83 725 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PANK2Q9BZ23 570 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 PLCB1Q9NQ66 1216 aa12.18□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CASP1P29466 404 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ATICP31939 592 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 THPOP40225 353 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 HACE1Q8IYU2 909 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 UBR7Q8N806 425 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 GLIS3Q8NEA6 775 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ENPP3O14638 875 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 NLRP7Q8WX94 980 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 KANSL3Q9P2N6 904 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MAFFQ9ULX9 164 aa12.17□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CETN3O15182 167 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 LINC00271P0C7V0 271 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 RPL9P32969 192 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 DHX8Q14562 1220 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ZC2HC1CQ53FD0 456 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 CEP72Q9P209 647 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 C5orf67F2Z3F1 127 aa12.16□□□□□ -0.46
CSGALNACT2-201ENST00000374466 TCP11X2Q5H9J9 407 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms