RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 NEDD1Q8NHV4 660 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 RAPGEF5Q92565 580 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
COL16A1-203ENST00000373672 POLIQ9UNA4 740 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.1■□□□□ 0.65
COL16A1-203ENST00000373672 SPATA31A3Q5VYP0 1347 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 A8MXQ7 604 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 KCNA1Q09470 495 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 TRIM45Q9H8W5 580 aaPredicted RBP19.1■□□□□ 0.65
COL16A1-203ENST00000373672 SNAP23O00161 211 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 FOXP2O15409 715 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 MAPRE2Q15555 327 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 ANKRD40Q6AI12 368 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 SPATA33Q96N06 139 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 SARS2Q9NP81 518 aaKnown RBP19.1■□□□□ 0.65
COL16A1-203ENST00000373672 KIF17Q9P2E2 1029 aa19.1■□□□□ 0.65
COL16A1-203ENST00000373672 FBXO2Q9UK22 296 aaPredicted RBP19.1■□□□□ 0.65
COL16A1-203ENST00000373672 HSPA9P38646 679 aaKnown RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PDIA5Q14554 519 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 STAT4Q14765 748 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 CEP70Q8NHQ1 597 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 TIPINQ9BVW5 301 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PLA2R1Q13018 1463 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 FOXN1O15353 648 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PRAMEP78395 509 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 LBRQ14739 615 aaKnown RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ANO5Q75V66 913 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 HAUS6Q7Z4H7 955 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 RMDN2Q96LZ7 410 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ZNF560Q96MR9 790 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 SLC13A1Q9BZW2 595 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 RNF103-CHMP3A0A140T963 221 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PIK3R2O00459 728 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 KIAA0391O15091 583 aaKnown RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 DUOXA2Q1HG44 320 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 STAG2Q8N3U4 1231 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 YY1AP1Q9H869 796 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PPP1R12AO14974 1030 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 CYP19A1P11511 503 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 COPB2P35606 906 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ARSEP51690 589 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 LRRC14Q15048 493 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ASPSCR1Q9BZE9 553 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ETNK1Q9HBU6 452 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 MOSPD1Q9UJG1 213 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 PREX2Q70Z35 1606 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 CDH6P55285 790 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 RBBP7Q16576 425 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 SYNE4Q8N205 404 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 COG1Q8WTW3 980 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 EGFL8Q99944 293 aa19.09■□□□□ 0.65
COL16A1-203ENST00000373672 ANKRD65E5RJM6 399 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 TYK2P29597 1187 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 PARP9Q8IXQ6 854 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 ZBED2Q9BTP6 218 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 EML4Q9HC35 981 aaKnown RBP19.08■□□□□ 0.65
COL16A1-203ENST00000373672 ADCY10Q96PN6 1610 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 EFNA5P52803 228 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 PCDHA10Q9Y5I2 948 aa19.08■□□□□ 0.65
COL16A1-203ENST00000373672 FOXO4P98177 505 aa19.08■□□□□ 0.64
COL16A1-203ENST00000373672 SENP1Q9P0U3 644 aa19.08■□□□□ 0.64
COL16A1-203ENST00000373672 GRAMD4Q6IC98 578 aa19.08■□□□□ 0.64
COL16A1-203ENST00000373672 SPATA4Q8NEY3 305 aa19.08■□□□□ 0.64
COL16A1-203ENST00000373672 PYGLP06737 847 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 NNMTP40261 264 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 C16orf87Q6PH81 154 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 METTL16Q86W50 562 aaKnown RBP19.07■□□□□ 0.64
COL16A1-203ENST00000373672 ICA1LQ8NDH6 482 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 KCNV2Q8TDN2 545 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 MYO1DO94832 1006 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 TBCCQ15814 346 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 CLEC17AQ6ZS10 378 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 ATL2Q8NHH9 583 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 NRKQ7Z2Y5 1582 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 HIF1AQ16665 826 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 KIF12Q96FN5 646 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 SUGT1Q9Y2Z0 365 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 FASTKD1Q53R41 847 aaKnown RBP19.07■□□□□ 0.64
COL16A1-203ENST00000373672 COG4Q9H9E3 785 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 TET3O43151 1660 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 YWHABP31946 246 aaKnown RBP19.07■□□□□ 0.64
COL16A1-203ENST00000373672 SLC26A7Q8TE54 656 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 LZICQ8WZA0 190 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 PDLIM2Q96JY6 352 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 WWP1Q9H0M0 922 aa19.07■□□□□ 0.64
COL16A1-203ENST00000373672 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
COL16A1-203ENST00000373672 RCOR2Q8IZ40 523 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 SH3TC2Q8TF17 1288 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 CHCHD3Q9NX63 227 aaKnown RBP19.06■□□□□ 0.64
COL16A1-203ENST00000373672 CYP26A1O43174 497 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 PDHA1P08559 390 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 FGFR4P22455 802 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 EIF3EP60228 445 aaKnown RBP19.06■□□□□ 0.64
COL16A1-203ENST00000373672 SPP2Q13103 211 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.06■□□□□ 0.644e-7■■■■■ 58.1
COL16A1-203ENST00000373672 NAF1Q96HR8 494 aaKnown RBP19.06■□□□□ 0.64
COL16A1-203ENST00000373672 SNX12Q9UMY4 172 aa19.06■□□□□ 0.64
COL16A1-203ENST00000373672 MOCS2O96007 188 aaPredicted RBP19.06■□□□□ 0.64
COL16A1-203ENST00000373672 AKR1B1P15121 316 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms