RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 CNTN2Q02246 1040 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 ZNF211Q13398 564 aaPredicted RBP20.21■□□□□ 0.83
USP49-202ENST00000373010 HLTFQ14527 1009 aaKnown RBP eCLIP20.21■□□□□ 0.83
USP49-202ENST00000373010 GNPTABQ3T906 1256 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 TMC2Q8TDI7 906 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 ARL8AQ96BM9 186 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 CDHR1Q96JP9 859 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 RUFY1Q96T51 708 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 HOXC10Q9NYD6 342 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 COQ4Q9Y3A0 265 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 CD2APQ9Y5K6 639 aa20.21■□□□□ 0.83
USP49-202ENST00000373010 OPA1O60313 960 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 RTN2O75298 545 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 SUPT20HL2P0C7V6 817 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 ECHS1P30084 290 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 SUPT20HL1Q3ZLR7 823 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 CYFIP1Q7L576 1253 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 ADAT2Q7Z6V5 191 aaKnown RBP20.2■□□□□ 0.82
USP49-202ENST00000373010 RHOT2Q8IXI1 618 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 FBXL13Q8NEE6 735 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 FAM76AQ8TAV0 307 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 DHX38Q92620 1227 aaKnown RBP20.2■□□□□ 0.82
USP49-202ENST00000373010 ALG3Q92685 438 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 TATDN2Q93075 761 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 ALG6Q9Y672 507 aa20.2■□□□□ 0.82
USP49-202ENST00000373010 GPC3P51654 580 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 GPC5P78333 572 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 CFAP58Q5T655 872 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 MIS18BP1Q6P0N0 1132 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 SV2AQ7L0J3 742 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 GPD1LQ8N335 351 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 WHAMMQ8TF30 809 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 PIK3R5Q8WYR1 880 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 IFT74Q96LB3 600 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 RNPC3Q96LT9 517 aaKnown RBP20.19■□□□□ 0.82
USP49-202ENST00000373010 NT5C1BQ96P26 610 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 RAB20Q9NX57 234 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 ZNFX1Q9P2E3 1918 aaKnown RBP20.19■□□□□ 0.82
USP49-202ENST00000373010 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 ATP4AP20648 1035 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 FMO1Q01740 532 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 R3HDM1Q15032 1099 aaKnown RBP20.19■□□□□ 0.82
USP49-202ENST00000373010 TTMPQ5BVD1 217 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 IQCKQ8N0W5 287 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 PI4K2AQ9BTU6 479 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 CELF4Q9BZC1 486 aaKnown RBP20.19■□□□□ 0.82
USP49-202ENST00000373010 CALCOCO1Q9P1Z2 691 aa20.19■□□□□ 0.82
USP49-202ENST00000373010 TTC7AQ9ULT0 858 aaPredicted RBP20.19■□□□□ 0.82
USP49-202ENST00000373010 GOLGA8KD6RF30 607 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 TTI1O43156 1089 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 COPB2P35606 906 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 NOL9Q5SY16 702 aaKnown RBP20.18■□□□□ 0.82
USP49-202ENST00000373010 AADACL2Q6P093 401 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 LEKR1Q6ZMV7 388 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 MREGQ8N565 214 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 TMEM143Q96AN5 459 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 NEUROG2Q9H2A3 272 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 ARHGAP28Q9P2N2 729 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 BHMG1C9JSJ3 638 aaPredicted RBP20.18■□□□□ 0.82
USP49-202ENST00000373010 STAM2O75886 525 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 CALCAP01258 141 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 KRT14P02533 472 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 CYP11B1P15538 503 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 HADHBP55084 474 aaKnown RBP20.18■□□□□ 0.82
USP49-202ENST00000373010 EMC2Q15006 297 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 BRDTQ58F21 947 aaPredicted RBP20.18■□□□□ 0.82
USP49-202ENST00000373010 XKR3Q5GH77 459 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 TREML2Q5T2D2 321 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 SEPT14Q6ZU15 432 aa20.18■□□□□ 0.82
USP49-202ENST00000373010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.82
USP49-202ENST00000373010 USP2O75604 605 aaPredicted RBP20.17■□□□□ 0.82
USP49-202ENST00000373010 MARCKSL1P49006 195 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 RTP1P59025 263 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 STXBP2Q15833 593 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 LMBRD2Q68DH5 695 aaPredicted RBP20.17■□□□□ 0.82
USP49-202ENST00000373010 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 KRT35Q92764 455 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 PKNOX2Q96KN3 472 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 SGIP1Q9BQI5 828 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 CARD9Q9H257 536 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 SLITRK6Q9H5Y7 841 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 ZNF233A6NK53 670 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 GARTP22102 1010 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 POLGP54098 1239 aaPredicted RBP20.17■□□□□ 0.82
USP49-202ENST00000373010 PPFIA1Q13136 1202 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 CUL1Q13616 776 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 MESDQ14696 234 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 C11orf63Q6NUN7 778 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 ANKRD35Q8N283 1001 aa20.17■□□□□ 0.82
USP49-202ENST00000373010 DAPK3O43293 454 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 GZMAP12544 262 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 CPNE8Q86YQ8 564 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 ZNF516Q92618 1163 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 ERVK-5Q9HDB9 667 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 ZNF302Q9NR11 478 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 DIS3Q9Y2L1 958 aaKnown RBP20.16■□□□□ 0.82
USP49-202ENST00000373010 SNCAIPQ9Y6H5 919 aa20.16■□□□□ 0.82
USP49-202ENST00000373010 SYNGAP1Q96PV0 1343 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms