RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 KIF22Q14807 665 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 MAMDC4Q6UXC1 1216 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 GPR161Q8N6U8 529 aaKnown RBP27.04■■□□□ 1.92
CTSA-203ENST00000372459 FBXL13Q8NEE6 735 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 TARS2Q9BW92 718 aaKnown RBP27.04■■□□□ 1.92
CTSA-203ENST00000372459 ERAP1Q9NZ08 941 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 GABPB1Q06547 395 aaPredicted RBP27.04■■□□□ 1.92
CTSA-203ENST00000372459 PSMD6Q15008 389 aa27.04■■□□□ 1.92
CTSA-203ENST00000372459 TOPORSQ9NS56 1045 aaPredicted RBP27.04■■□□□ 1.92
CTSA-203ENST00000372459 TFRCP02786 760 aaKnown RBP27.03■■□□□ 1.92
CTSA-203ENST00000372459 MAPK4P31152 587 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 MATR3P43243 847 aaKnown RBP eCLIP27.03■■□□□ 1.92
CTSA-203ENST00000372459 LAMTOR4Q0VGL1 99 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 MKRN4PQ13434 485 aaPredicted RBP27.03■■□□□ 1.92
CTSA-203ENST00000372459 CST9Q5W186 159 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 SV2AQ7L0J3 742 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 PLEKHH3Q7Z736 793 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 SLC30A5Q8TAD4 765 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 SEMA4DQ92854 862 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 RAB20Q9NX57 234 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 INTUQ9ULD6 942 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 SNX12Q9UMY4 172 aa27.03■■□□□ 1.92
CTSA-203ENST00000372459 PRLRP16471 622 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 MFAP3P55082 362 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 CKAP4Q07065 602 aaKnown RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 CDCA2Q69YH5 1023 aaPredicted RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 ZPBP2Q6X784 338 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 ZBTB8OSQ8IWT0 167 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 LRRC71Q8N4P6 559 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 LNX1Q8TBB1 728 aaPredicted RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 FNBP1Q96RU3 617 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 MSTO1Q9BUK6 570 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 SRGAP2O75044 1071 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 NLRP11P59045 1033 aaKnown RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 PPTC7Q8NI37 304 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 U2AF1L4Q8WU68 220 aaKnown RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 EMID1Q96A84 441 aaPredicted RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 ZBTB45Q96K62 511 aaPredicted RBP27.02■■□□□ 1.92
CTSA-203ENST00000372459 SYT11Q9BT88 431 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 KATNBL1Q9H079 304 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 C2orf40Q9H1Z8 148 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 ANKFY1Q9P2R3 1169 aa27.02■■□□□ 1.92
CTSA-203ENST00000372459 MYH10P35580 1976 aa27.01■■□□□ 1.92
CTSA-203ENST00000372459 A0A0B4J269 797 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 H2AFZP0C0S5 128 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 HUNKP57058 714 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 CLDN10P78369 228 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 H2AFVQ71UI9 128 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 GLYCTKQ8IVS8 523 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 PPM1KQ8N3J5 372 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 TAS1R2Q8TE23 839 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 NT5C1BQ96P26 610 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 MRPL4Q9BYD3 311 aaKnown RBP27.01■■□□□ 1.91
CTSA-203ENST00000372459 HAPLN2Q9GZV7 340 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 SUCLA2Q9P2R7 463 aaPredicted RBP27.01■■□□□ 1.91
CTSA-203ENST00000372459 TSKSQ9UJT2 592 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 PCDHGC5Q9Y5F6 944 aa27.01■■□□□ 1.91
CTSA-203ENST00000372459 SNAI1O95863 264 aaPredicted RBP27■■□□□ 1.91
CTSA-203ENST00000372459 SRGAP2CP0DJJ0 459 aa27■■□□□ 1.91
CTSA-203ENST00000372459 TNFAIP3P21580 790 aa27■■□□□ 1.91
CTSA-203ENST00000372459 ACOT2P49753 483 aa27■■□□□ 1.91
CTSA-203ENST00000372459 IFI16Q16666 785 aaKnown RBP27■■□□□ 1.91
CTSA-203ENST00000372459 GJC2Q5T442 439 aaPredicted RBP27■■□□□ 1.91
CTSA-203ENST00000372459 RNF149Q8NC42 400 aa27■■□□□ 1.91
CTSA-203ENST00000372459 OLIG1Q8TAK6 271 aa27■■□□□ 1.91
CTSA-203ENST00000372459 MAML3Q96JK9 1138 aa27■■□□□ 1.91
CTSA-203ENST00000372459 CCDC113Q9H0I3 377 aa27■■□□□ 1.91
CTSA-203ENST00000372459 ARGLU1Q9NWB6 273 aaPredicted RBP27■■□□□ 1.91
CTSA-203ENST00000372459 LGALS2P05162 132 aa27■■□□□ 1.91
CTSA-203ENST00000372459 EDN1P05305 212 aa27■■□□□ 1.91
CTSA-203ENST00000372459 ADCYAP1R1P41586 468 aa27■■□□□ 1.91
CTSA-203ENST00000372459 CRELD2Q6UXH1 353 aaPredicted RBP27■■□□□ 1.91
CTSA-203ENST00000372459 RBAKQ9NYW8 714 aaPredicted RBP27■■□□□ 1.91
CTSA-203ENST00000372459 HYOU1Q9Y4L1 999 aa27■■□□□ 1.91
CTSA-203ENST00000372459 ADGRA2Q96PE1 1338 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 PALMO75781 387 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 TCP1P17987 556 aaKnown RBP26.99■■□□□ 1.91
CTSA-203ENST00000372459 TFDP1Q14186 410 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 ZNF484Q5JVG2 852 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 TRAPPC12Q8WVT3 735 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 RNPEPQ9H4A4 650 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 ZNF446Q9NWS9 450 aa26.99■■□□□ 1.91
CTSA-203ENST00000372459 MSCO60682 206 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 ZC3H11AO75152 810 aaKnown RBP eCLIP26.98■■□□□ 1.91
CTSA-203ENST00000372459 TNNI1P19237 187 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 CLCN6P51797 869 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 MAPK6Q16659 721 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 EFCAB12Q6NXP0 572 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 C15orf39Q6ZRI6 1047 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 RHPN2Q8IUC4 686 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 HELQQ8TDG4 1101 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 KAT5Q92993 513 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 RPGRIP1Q96KN7 1286 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 CAPZA3Q96KX2 299 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 AGPAT1Q99943 283 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 NMRK2Q9NPI5 230 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 SLC15A5A6NIM6 579 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 CLDN3O15551 220 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 KREMEN1Q96MU8 473 aa26.98■■□□□ 1.91
CTSA-203ENST00000372459 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms