RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 PICK1Q9NRD5 415 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 AAASQ9NRG9 546 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 BTG4Q9NY30 223 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SEC63Q9UGP8 760 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PCDHA12Q9UN75 941 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 ALG6Q9Y672 507 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 ADAMTSL3P82987 1691 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 COL18A1P39060 1754 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 FOXN3O00409 490 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 KCNQ2O43526 872 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CHMP2AO43633 222 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 GCNT3O95395 438 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 OAS1P00973 400 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 AFPP02771 609 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 XRCC5P13010 732 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 BRAFP15056 766 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 VCAM1P19320 739 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 HIBADHP31937 336 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 GJC1P36383 396 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CDK8P49336 464 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 RAB27AP51159 221 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SLC8A3P57103 927 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 MAPK7Q13164 816 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PSMD2Q13200 908 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 BLMHQ13867 455 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 TMEM119Q4V9L6 283 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SLFN11Q7Z7L1 901 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CCNJLQ8IV13 435 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 C4orf33Q8N1A6 199 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 C1orf131Q8NDD1 294 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SLC30A5Q8TAD4 765 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SLC35C1Q96A29 364 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 KLF6Q99612 283 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 REPIN1Q9BWE0 567 aaKnown RBP5.82□□□□□ -1.48
ATG4A-204ENST00000372246 GPR88Q9GZN0 384 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CUEDC2Q9H467 287 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 PCIF1Q9H4Z3 704 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SH3GLB2Q9NR46 395 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 ARHGEF3Q9NR81 526 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 FAM114A2Q9NRY5 505 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CHST7Q9NS84 486 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 DLGAP2Q9P1A6 1054 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 ZFATQ9P243 1243 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 SWAP70Q9UH65 585 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 DNAJC12Q9UKB3 198 aa5.82□□□□□ -1.48
ATG4A-204ENST00000372246 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 MYH3P11055 1940 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CETN3O15182 167 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PEX11AO75192 247 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SPATA31D3P0C874 917 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ALADP13716 330 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ETS2P15036 469 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 COMTP21964 271 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ADCY7P51828 1080 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 IRX1P78414 480 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 MXRA7P84157 204 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 NFIXQ14938 502 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TMEM266Q2M3C6 531 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PRR16Q569H4 304 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 AP1ARQ63HQ0 302 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PHLDB3Q6NSJ2 640 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TMEM154Q6P9G4 183 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SPATA31D4Q6ZUB0 917 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ASRGL1Q7L266 308 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 APBB1IPQ7Z5R6 666 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 HOOK3Q86VS8 718 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 AMIGO3Q86WK7 504 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DGKHQ86XP1 1220 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CATSPER3Q86XQ3 398 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DAGLBQ8NCG7 672 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 FAM13CQ8NE31 585 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TBC1D16Q8TBP0 767 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SEC14L1Q92503 715 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SLITRK6Q9H5Y7 841 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 RIC8AQ9NPQ8 531 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 LUC7LQ9NQ29 371 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 KLHL11Q9NVR0 708 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SUCLA2Q9P2R7 463 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DCTN4Q9UJW0 460 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 C2CD2Q9Y426 696 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PCDHA3Q9Y5H8 950 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PLCH1Q4KWH8 1693 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ASTN1O14525 1302 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 MYO3BQ8WXR4 1341 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DOCK2Q92608 1830 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TOGARAM1Q9Y4F4 1720 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CASZ1Q86V15 1759 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 A6NHS1 94 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC169A6NNP5 214 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC188H7C350 402 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 FLOT1O75955 427 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 NR3C1P04150 777 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 T-ENOLP0DO92 83 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CALRP27797 417 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 HOXA13P31271 388 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CPA2P48052 419 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 WDR4P57081 412 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PPATQ06203 517 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 GIT2Q14161 759 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms