RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 E7ENQ6 273 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 POLR2BP30876 1174 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 EPHX2P34913 555 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 AARSP49588 968 aaKnown RBP eCLIP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 EIF2B2P49770 351 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 SPARCL1Q14515 664 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 COG2Q14746 738 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 PARD3BQ8TEW8 1205 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 PCIF1Q9H4Z3 704 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 NDUFA13Q9P0J0 144 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 MTRQ99707 1265 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 SMARCAD1Q9H4L7 1026 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 TCF3P15923 654 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 PTPROQ16827 1216 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 CDC42EP5Q6NZY7 148 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 INTS5Q6P9B9 1019 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 LRRC39Q96DD0 335 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 PARVGQ9HBI0 331 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 TRPC7Q9HCX4 862 aa14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 ADARB2Q9NS39 739 aaKnown RBP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 MORC2Q9Y6X9 1032 aaPredicted RBP14.9□□□□□ -0.02
RAPGEF1-202ENST00000372190 ENC1O14682 589 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 PSMC2P35998 433 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 MFAP3P55082 362 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 UBE2Q1Q7Z7E8 422 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 OR6J1Q8NGC5 347 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 B4GALNT2Q8NHY0 566 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 MTA3Q9BTC8 594 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 FAM129AQ9BZQ8 928 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 TBC1D22BQ9NU19 505 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 NFKBIL1Q9UBC1 381 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 A0A0G2JND7 137 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 GMNCA6NCL1 334 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 CD2BP2O95400 341 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 AKR1B1P15121 316 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 TSC22D1Q15714 1073 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ANKRD13AQ8IZ07 590 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 RNF217Q8TC41 542 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 NSUN4Q96CB9 384 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 NT5C1BQ96P26 610 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ARHGEF3Q9NR81 526 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 SUN2Q9UH99 717 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 POLIQ9UNA4 740 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 RECQLP46063 649 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 PPP1R18Q6NYC8 613 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ELMOD1Q8N336 334 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ZBTB18Q99592 522 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ETNK1Q9HBU6 452 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 STK17AQ9UEE5 414 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 CDC40O60508 579 aaKnown RBP eCLIP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 CHEK2O96017 543 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 LRPAP1P30533 357 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 MLH1P40692 756 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 RASSF7Q02833 373 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 TAGAPQ8N103 731 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 CLEC4MQ9H2X3 399 aaPredicted RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 ZNF839A8K0R7 811 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 VCPP55072 806 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 NR5A1Q13285 461 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 SURF1Q15526 300 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 TWF2Q6IBS0 349 aaKnown RBP14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 SLC26A7Q8TE54 656 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 FAM151AQ8WW52 585 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 RRAGCQ9HB90 399 aa14.89□□□□□ -0.03
RAPGEF1-202ENST00000372190 KDM6AO15550 1401 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 WDR64B1ANS9 1081 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 RGS20O76081 388 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 PHKA2P46019 1235 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 FBXO38Q6PIJ6 1188 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 ADGRF4Q8IZF3 695 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 HINFPQ9BQA5 517 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 DEFB129Q9H1M3 183 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 ADNPQ9H2P0 1102 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 TOMM70O94826 608 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 HSPA6P17066 643 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 AKR1D1P51857 326 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 KRT76Q01546 638 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 SLC39A14Q15043 492 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 DPCR1Q3MIW9 517 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 DAB2IPQ5VWQ8 1189 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 EMBQ6PCB8 327 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 MTIF3Q9H2K0 278 aaKnown RBP14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 NSMCE4AQ9NXX6 385 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 TMEM247A6NEH6 219 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 K7ERI5 159 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 CAND2O75155 1236 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 CCND1P24385 295 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 PRELPP51888 382 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 SIRT2Q8IXJ6 389 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 CNOT6LQ96LI5 555 aaKnown RBP14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 POLR3EQ9NVU0 708 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 TRIM33Q9UPN9 1127 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 H2AFZP0C0S5 128 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 PLA2G4BP0C869 781 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 CYP2B6P20813 491 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 EHHADHQ08426 723 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 GRM4Q14833 912 aa14.88□□□□□ -0.03
RAPGEF1-202ENST00000372190 BEND6Q5SZJ8 279 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms