RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SLC39A2Q9NP94 309 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 BLOC1S4Q9NUP1 217 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 DDX25Q9UHL0 483 aaKnown RBP12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 CENPFP49454 3210 aa12.39□□□□□ -0.43
TSPAN1-201ENST00000372003 LCTP09848 1927 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 MYMKA6NI61 221 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 E7EVH7 732 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 MYO1FO00160 1098 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 BUB1O43683 1085 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 MSCO60682 206 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 TGFB3P10600 412 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 ICAM3P32942 547 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 EIF3BP55884 814 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 SP4Q02446 784 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 ZCWPW2Q504Y3 356 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 ZC3H3Q8IXZ2 948 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 OR6J1Q8NGC5 347 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 U2AF1L4Q8WU68 220 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 RAD54LQ92698 747 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 MS4A14Q96JA4 679 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 SLITRK6Q9H5Y7 841 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 XPNPEP3Q9NQH7 507 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 EHD2Q9NZN4 543 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 GNEQ9Y223 722 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 PLXNA1Q9UIW2 1896 aa12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
TSPAN1-201ENST00000372003 CYP3A7-CYP3A51PA0A087WV96 503 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MAFGO15525 162 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 RAD51CO43502 376 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SLC37A4O43826 429 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MARCH6O60337 910 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 DUSP11O75319 330 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SGPL1O95470 568 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GGPS1O95749 300 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GJB1P08034 283 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 UBA1P22314 1058 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CYP3A7P24462 503 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 KLRC1P26715 233 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 HSD17B3P37058 310 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 TECP42680 631 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 TMEM119Q4V9L6 283 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 PPP4R3CPQ6ZMV5 832 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MYOCDQ8IZQ8 938 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GIMAP7Q8NHV1 300 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 LMBR1Q8WVP7 490 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SEC14L1Q92503 715 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 LENG9Q96B70 501 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 PNMA5Q96PV4 448 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 KDM4CQ9H3R0 1056 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 AGO4Q9HCK5 861 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MCM8Q9UJA3 840 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MSH4O15457 936 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 NOL4O94818 638 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 KIF4AO95239 1232 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GH1P01241 217 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 ECHS1P30084 290 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SLC8A1P32418 973 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 NPEPPSP55786 919 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 BEX3Q00994 111 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 XRCC4Q13426 336 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CLUL1Q15846 466 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SNCBQ16143 134 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 ASIC2Q16515 512 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 Q4G0T1 1027 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CELF3Q5SZQ8 465 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 MOXD1Q6UVY6 613 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 NIPA1Q7RTP0 329 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CROCCP2Q86T23 111 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 GPATCH11Q8N954 259 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 CCDC26Q8TAB7 109 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 PSMB7Q99436 277 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 NAP1L4Q99733 375 aaKnown RBP12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SPC25Q9HBM1 224 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 SLC40A1Q9NP59 571 aa12.37□□□□□ -0.43
TSPAN1-201ENST00000372003 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms