RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GNAT1P11488 350 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 ELNP15502 786 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 GCLMP48507 274 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 MXI1P50539 228 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 MTF1Q14872 753 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 NLRP7Q8WX94 980 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 SIX2Q9NPC8 291 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 MYO6Q9UM54 1294 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 PPP2R2CQ9Y2T4 447 aa28.56■■■□□ 2.16
ATPAF1-202ENST00000371937 HMGCRP04035 888 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 CCDC175P0C221 793 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 NLRP11P59045 1033 aaKnown RBP28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 APBA1Q02410 837 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 ATF7IP2Q5U623 682 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 EHBP1Q8NDI1 1231 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 PPP1R13BQ96KQ4 1090 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 PRIMPOLQ96LW4 560 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 SCLT1Q96NL6 688 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 MTG1Q9BT17 334 aaPredicted RBP28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 INTS2Q9H0H0 1204 aaKnown RBP28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 MINDY3Q9H8M7 445 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 TTLL13PA6NNM8 815 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 LRRIQ3A6PVS8 624 aaPredicted RBP28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 ACOT2P49753 483 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 GPC3P51654 580 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 ADAM17P78536 824 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 MCL1Q07820 350 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 PSMD6Q15008 389 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 TMEM132AQ24JP5 1023 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 SFMBT2Q5VUG0 894 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 KRT39Q6A163 491 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 CCDC170Q8IYT3 715 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 RAET1EQ8TD07 263 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 TMEM8AQ9HCN3 771 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 SAGE1Q9NXZ1 904 aa28.55■■■□□ 2.16
ATPAF1-202ENST00000371937 MYADML2A6NDP7 307 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 GOLGA6L9A6NEM1 432 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 HTRA3P83110 453 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 MPZL3Q6UWV2 235 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 CRELD2Q6UXH1 353 aaPredicted RBP28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 SRGAP1Q7Z6B7 1085 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 C7orf31Q8N865 590 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 PXYLP1Q8TE99 480 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 SPAG5Q96R06 1193 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 FNBP1Q96RU3 617 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 TMEM117Q9H0C3 514 aa28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 EPN1Q9Y6I3 576 aaPredicted RBP28.54■■■□□ 2.16
ATPAF1-202ENST00000371937 FKTNO75072 461 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 PGK1P00558 417 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 DLATP10515 647 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 CYP2C9P11712 490 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 PROZP22891 400 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 XPNPEP3Q9NQH7 507 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 RBAKQ9NYW8 714 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 TNFSF13BQ9Y275 285 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 ADGRG1Q9Y653 693 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 C17orf102A2RUQ5 167 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 OGTO15294 1046 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 RFX1P22670 979 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 CYLC1P35663 651 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 CLDN10P78369 228 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 EPC2Q52LR7 807 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 DNTTIP2Q5QJE6 756 aaKnown RBP28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 NHEJ1Q9H9Q4 299 aaPredicted RBP28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 PTPRHQ9HD43 1115 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 APEX2Q9UBZ4 518 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 FHOD1Q9Y613 1164 aa28.53■■■□□ 2.16
ATPAF1-202ENST00000371937 THSD7BQ9C0I4 1608 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 TULP1O00294 542 aaPredicted RBP28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 NDUFA10O95299 355 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 CCND3P30281 292 aaPredicted RBP28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 ZBTB33Q86T24 672 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 LMO3Q8TAP4 145 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 PPP1R16BQ96T49 567 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 POP1Q99575 1024 aaKnown RBP28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 DESI2Q9BSY9 194 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 FAM49AQ9H0Q0 323 aaPredicted RBP28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 AIPL1Q9NZN9 384 aa28.52■■■□□ 2.16
ATPAF1-202ENST00000371937 ABLIM1O14639 778 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 IQCF3P0C7M6 154 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 HARSP12081 509 aaKnown RBP28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 RAPGEF1Q13905 1077 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 MAP3K21Q5TCX8 1036 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 CCDC42Q96M95 316 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 HDAC6Q9UBN7 1215 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 COQ4Q9Y3A0 265 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 CNTNAP2Q9UHC6 1331 aa28.51■■■□□ 2.15
ATPAF1-202ENST00000371937 B4GALT5O43286 388 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 ADAMTS4O75173 837 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 HOXC8P31273 242 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 MAP2K1Q02750 393 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 PTPN14Q15678 1187 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 ZNF568Q3ZCX4 644 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 SLC9C1Q4G0N8 1177 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 ZNF710Q8N1W2 664 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 C16orf45Q96MC5 204 aaPredicted RBP28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 FAM189A1O60320 539 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 PRMT2P55345 433 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 AMHR2Q16671 573 aa28.5■■■□□ 2.15
ATPAF1-202ENST00000371937 FMNL3Q8IVF7 1028 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms