RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 CBWD6Q4V339 395 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 DCAF17Q5H9S7 520 aaPredicted RBP11.86□□□□□ -0.51
LCN1-202ENST00000371781 CBWD3Q5JTY5 395 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 CBWD5Q5RIA9 395 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 CCDC186Q7Z3E2 898 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 TMEM192Q8IY95 271 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 TMEM130Q8N3G9 435 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 PCSK9Q8NBP7 692 aaKnown RBP11.86□□□□□ -0.51
LCN1-202ENST00000371781 CACTINQ8WUQ7 758 aaKnown RBP11.86□□□□□ -0.51
LCN1-202ENST00000371781 NLRP7Q8WX94 980 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 MFSD14AQ96MC6 490 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 ERGIC2Q96RQ1 377 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
LCN1-202ENST00000371781 PRMT7Q9NVM4 692 aaPredicted RBP11.86□□□□□ -0.51
LCN1-202ENST00000371781 TANC1Q9C0D5 1861 aa11.86□□□□□ -0.51
LCN1-202ENST00000371781 MAPK13O15264 365 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 EXTL3O43909 919 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 TOM1L1O75674 476 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 NOL4O94818 638 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 AFPP02771 609 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 HOXA11P31270 313 aaPredicted RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 ACOT2P49753 483 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 UBXN1Q04323 297 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 PRPF4BQ13523 1007 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 SNRNP35Q16560 246 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 ATF7IP2Q5U623 682 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 SRGAP1Q7Z6B7 1085 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 FAM228AQ86W67 206 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 GPD1LQ8N335 351 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 ZNF830Q96NB3 372 aaPredicted RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 FAM213AQ9BRX8 229 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 CXCL16Q9H2A7 254 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 GANQ9H2C0 597 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 METTL14Q9HCE5 456 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 SIX2Q9NPC8 291 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 KCNG1Q9UIX4 513 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 TNFSF13BQ9Y275 285 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
LCN1-202ENST00000371781 CDY2AQ9Y6F7 541 aa11.85□□□□□ -0.51
LCN1-202ENST00000371781 PDCD11Q14690 1871 aaKnown RBP11.85□□□□□ -0.51
LCN1-202ENST00000371781 RANBP2P49792 3224 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 DNM1LO00429 736 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 B4GALT4O60513 344 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CABYRO75952 493 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CHRNA1P02708 482 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CTSHP09668 335 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 ABCD1P33897 745 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 FMO5P49326 533 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CCZ1BP86790 482 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 NOLC1Q14978 699 aaKnown RBP eCLIP11.84□□□□□ -0.51
LCN1-202ENST00000371781 ZNF568Q3ZCX4 644 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 UBXN11Q5T124 520 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 SPECC1LQ69YQ0 1117 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 TAF2Q6P1X5 1199 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 MPZL3Q6UWV2 235 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 ANKRD20A12PQ8NF67 263 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 LMO3Q8TAP4 145 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 PARD3BQ8TEW8 1205 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 DIS3LQ8TF46 1054 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 DPF3Q92784 378 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 PRIMPOLQ96LW4 560 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 POP1Q99575 1024 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 MSTO1Q9BUK6 570 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 TRPV6Q9H1D0 765 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 GINS2Q9Y248 185 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 NOC2LQ9Y3T9 749 aaKnown RBP11.84□□□□□ -0.51
LCN1-202ENST00000371781 TRPV2Q9Y5S1 764 aa11.84□□□□□ -0.51
LCN1-202ENST00000371781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
LCN1-202ENST00000371781 OGTO15294 1046 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 MFAP3LO75121 409 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 GNAT1P11488 350 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 ACTN1P12814 892 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 CDK7P50613 346 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 VAMP7P51809 220 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 CRYBB1P53674 252 aaPredicted RBP11.83□□□□□ -0.52
LCN1-202ENST00000371781 PTPN11Q06124 597 aaPredicted RBP11.83□□□□□ -0.52
LCN1-202ENST00000371781 RBL2Q08999 1139 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 MBTPS1Q14703 1052 aa11.83□□□□□ -0.52
LCN1-202ENST00000371781 PSMD6Q15008 389 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms