RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 MED4Q9NPJ6 270 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 SNX24Q9Y343 169 aa12.67□□□□□ -0.38
PDE6C-201ENST00000371447 CD58P19256 250 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 COMTP21964 271 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 TRIP13Q15645 432 aaPredicted RBP12.66□□□□□ -0.38
PDE6C-201ENST00000371447 SLC39A4Q6P5W5 647 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 SLC16A10Q8TF71 515 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 ERVK-5Q9HDB9 667 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 CYP26B1Q9NR63 512 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 ATP8A1Q9Y2Q0 1164 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 GTPBP10A4D1E9 387 aaKnown RBP12.66□□□□□ -0.38
PDE6C-201ENST00000371447 SPDYE16A6NNV3 312 aaPredicted RBP12.66□□□□□ -0.38
PDE6C-201ENST00000371447 NLRP11P59045 1033 aaKnown RBP12.66□□□□□ -0.38
PDE6C-201ENST00000371447 GTF2BQ00403 316 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 VGLL4Q14135 290 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 KRT39Q6A163 491 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 PARD3BQ8TEW8 1205 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 KLRG1Q96E93 195 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 XPNPEP1Q9NQW7 623 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 DBR1Q9UK59 544 aaKnown RBP12.66□□□□□ -0.38
PDE6C-201ENST00000371447 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
PDE6C-201ENST00000371447 TCRBV7S2A1N4TA0A589 114 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 KCNA2P16389 499 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 HOXA7P31268 230 aaPredicted RBP12.65□□□□□ -0.38
PDE6C-201ENST00000371447 PLTPP55058 493 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 STRN3Q13033 797 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 NNTQ13423 1086 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 GNPTABQ3T906 1256 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 TMEM63BQ5T3F8 832 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 DPH6Q7L8W6 267 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 C18orf8Q96DM3 657 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 NUP85Q9BW27 656 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 RAB20Q9NX57 234 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 PLAAQ9Y263 795 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 K7ERI5 159 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 SFNP31947 248 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 GNGT1P63211 74 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 FAM182AQ5T1J6 154 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 SYCE1Q8N0S2 351 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 HEMGNQ9BXL5 484 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 MFAP3P55082 362 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 DHX9Q08211 1270 aaKnown RBP12.65□□□□□ -0.38
PDE6C-201ENST00000371447 GJC2Q5T442 439 aaPredicted RBP12.65□□□□□ -0.38
PDE6C-201ENST00000371447 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 FBXL13Q8NEE6 735 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 EPS8L1Q8TE68 723 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 ATP6V0A4Q9HBG4 840 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 ZNF302Q9NR11 478 aa12.65□□□□□ -0.38
PDE6C-201ENST00000371447 CFHP08603 1231 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 TMEM253P0C7T8 217 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CTNNA1P35221 906 aaKnown RBP12.64□□□□□ -0.39
PDE6C-201ENST00000371447 ACTN2P35609 894 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 PIK3CAP42336 1068 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 PDE6CP51160 858 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 EMC2Q15006 297 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 STXBP2Q15833 593 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 TTMPQ5BVD1 217 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 ASAP3Q8TDY4 903 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 MAGOHBQ96A72 148 aaKnown RBP12.64□□□□□ -0.39
PDE6C-201ENST00000371447 PBKQ96KB5 322 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 GINS2Q9Y248 185 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 ANKRD62A6NC57 917 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 IRF6O14896 467 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CYP11B1P15538 503 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
PDE6C-201ENST00000371447 GUCY1A3Q02108 690 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CATSPERGQ6ZRH7 1159 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 STRA6Q9BX79 667 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CD2APQ9Y5K6 639 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 GPC5P78333 572 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 EMBQ6PCB8 327 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 TMEM270Q6UE05 265 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 COPS5Q92905 334 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 HOXC10Q9NYD6 342 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 CSADQ9Y600 493 aa12.64□□□□□ -0.39
PDE6C-201ENST00000371447 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 ZNF233A6NK53 670 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 IFFO1Q0D2I5 559 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 ORC1Q13415 861 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 EAPPQ56P03 285 aaPredicted RBP12.63□□□□□ -0.39
PDE6C-201ENST00000371447 CCDC50Q8IVM0 306 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 SULF1Q8IWU6 871 aa12.63□□□□□ -0.39
PDE6C-201ENST00000371447 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms