RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 PAGR1Q9BTK6 254 aa13.84□□□□□ -0.19
GPC3-201ENST00000370818 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
GPC3-201ENST00000370818 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
GPC3-201ENST00000370818 ATXN2Q99700 1313 aaKnown RBP13.84□□□□□ -0.19
GPC3-201ENST00000370818 IGKV6D-21A0A0A0MT36 114 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 H0YHG0 523 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 FOXN3O00409 490 aaPredicted RBP13.83□□□□□ -0.19
GPC3-201ENST00000370818 PMM2O15305 246 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 RFX1P22670 979 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 MCM3P25205 808 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 GNGT1P63211 74 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 MOGSQ13724 837 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 ARHGAP44Q17R89 818 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 VPS36Q86VN1 386 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 POLR3FQ9H1D9 316 aaPredicted RBP13.83□□□□□ -0.19
GPC3-201ENST00000370818 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 ZNF302Q9NR11 478 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 SMARCAL1Q9NZC9 954 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 KCNH4Q9UQ05 1017 aa13.83□□□□□ -0.19
GPC3-201ENST00000370818 ARID2Q68CP9 1835 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 FARP2O94887 1054 aaPredicted RBP13.83□□□□□ -0.2
GPC3-201ENST00000370818 C2orf54Q08AI8 447 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 WLSQ5T9L3 541 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 GLYCTKQ8IVS8 523 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 OTUD6BQ8N6M0 293 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 N4BP2L2Q92802 583 aaPredicted RBP13.83□□□□□ -0.2
GPC3-201ENST00000370818 PCYT2Q99447 389 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 EHD2Q9NZN4 543 aa13.83□□□□□ -0.2
GPC3-201ENST00000370818 MEFVO15553 781 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 OATP04181 439 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 RDXP35241 583 aaKnown RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 MXI1P50539 228 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 ITIH3Q06033 890 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 EMC2Q15006 297 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 SPATA4Q8NEY3 305 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 RNF217Q8TC41 542 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 PARD3BQ8TEW8 1205 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 UBE2TQ9NPD8 197 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 PACSIN2Q9UNF0 486 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 AGTPBP1Q9UPW5 1226 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 GSTTP1A0A1W2PQM5 241 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 CETN1Q12798 172 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 KIF22Q14807 665 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 B4GALNT4Q76KP1 1039 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 LRRC57Q8N9N7 239 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 CCDC127Q96BQ5 260 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 DHX33Q9H6R0 707 aaKnown RBP13.82□□□□□ -0.2
GPC3-201ENST00000370818 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 USP20Q9Y2K6 914 aa13.82□□□□□ -0.2
GPC3-201ENST00000370818 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 ZMYND10O75800 440 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 MYBL2P10244 700 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 PAX7P23759 505 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 Q3C1V9 767 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 TTC19Q6DKK2 380 aaPredicted RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 CCNI2Q6ZMN8 369 aaPredicted RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 POMGNT1Q8WZA1 660 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 KAT5Q92993 513 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 TMEM143Q96AN5 459 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 MS4A14Q96JA4 679 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 FGD4Q96M96 766 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 MFSD14AQ96MC6 490 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 SELENOOQ9BVL4 669 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 GOLPH3Q9H4A6 298 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 INTUQ9ULD6 942 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 TARSL2A2RTX5 802 aaKnown RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 EPHX2P34913 555 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 NF2P35240 595 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 PPIL2Q13356 520 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 PALB2Q86YC2 1186 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 MMGT1Q8N4V1 131 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 TPCN2Q8NHX9 752 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 ZC3H15Q8WU90 426 aaKnown RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 SEMA4DQ92854 862 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 OPTNQ96CV9 577 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 IFT74Q96LB3 600 aa13.81□□□□□ -0.2
GPC3-201ENST00000370818 NIFKQ9BYG3 293 aaKnown RBP13.81□□□□□ -0.2
GPC3-201ENST00000370818 A0A0A6YYK5 440 aaPredicted RBP13.8□□□□□ -0.2
GPC3-201ENST00000370818 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 PGK2P07205 417 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 GALCP54803 685 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 PORCNQ9H237 461 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms