RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
COL9A1-204ENST00000370496 ZBTB33Q86T24 672 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 MAP4K3Q8IVH8 894 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 RSPH1Q8WYR4 309 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 SAMD11Q96NU1 681 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 CDT1Q9H211 546 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 ST6GALNAC4Q9H4F1 302 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 UBN1Q9NPG3 1134 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 EXOC1Q9NV70 894 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 TOM1L1O75674 476 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 MYBP10242 640 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 MLH1P40692 756 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 GTF2BQ00403 316 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 NOMO2Q5JPE7 1267 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 AGMOQ6ZNB7 445 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 ZNF720Q7Z2F6 126 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
COL9A1-204ENST00000370496 KCNN1Q92952 543 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 HPS3Q969F9 1004 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 CASD1Q96PB1 797 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 GBP4Q96PP9 640 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 RPS6KC1Q96S38 1066 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 C17orf80Q9BSJ5 609 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 SEMA6BQ9H3T3 888 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 PARP2Q9UGN5 583 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 EXOC7Q9UPT5 735 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 PCDHB13Q9Y5F0 798 aa16.26■□□□□ 0.19
COL9A1-204ENST00000370496 CHD9Q3L8U1 2897 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 PVALEFA0A1B0GWK0 134 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 KINO60870 393 aaKnown RBP16.25■□□□□ 0.19
COL9A1-204ENST00000370496 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
COL9A1-204ENST00000370496 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 MCF2P10911 925 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 AKAP5P24588 427 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 CASP5P51878 434 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 ERVK-21P61565 698 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 UBE2HP62256 183 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 RNASELQ05823 741 aaKnown RBP16.25■□□□□ 0.19
COL9A1-204ENST00000370496 L1TD1Q5T7N2 865 aaKnown RBP16.25■□□□□ 0.19
COL9A1-204ENST00000370496 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 FBXO22Q8NEZ5 403 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 CCDC47Q96A33 483 aaKnown RBP16.25■□□□□ 0.19
COL9A1-204ENST00000370496 ACCSQ96QU6 501 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 HCSTQ9UBK5 93 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
COL9A1-204ENST00000370496 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 CITO14578 2027 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 CLDN3O15551 220 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 PPP1R37O75864 691 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 RECQL4O94761 1208 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 PIGRP01833 764 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 LAG3P18627 525 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 PROZP22891 400 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 GRIN2CQ14957 1233 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 POSTNQ15063 836 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 TMEM192Q8IY95 271 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 SYCP3Q8IZU3 236 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 GDPD5Q8WTR4 605 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 CLP1Q92989 425 aaKnown RBP16.24■□□□□ 0.19
COL9A1-204ENST00000370496 GAD1Q99259 594 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 CCDC94Q9BW85 323 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-204ENST00000370496 PTPRHQ9HD43 1115 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 AAASQ9NRG9 546 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 TYW1Q9NV66 732 aaKnown RBP16.24■□□□□ 0.19
COL9A1-204ENST00000370496 TBC1D13Q9NVG8 400 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 HOOK1Q9UJC3 728 aaKnown RBP16.24■□□□□ 0.19
COL9A1-204ENST00000370496 GIT1Q9Y2X7 761 aa16.24■□□□□ 0.19
COL9A1-204ENST00000370496 UBE4BO95155 1302 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 ZC3H11AO75152 810 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 NR1I2O75469 434 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 OFD1O75665 1012 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 YARSP54577 528 aaKnown RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 OSTNP61366 133 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 EPC2Q52LR7 807 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 ENGASEQ8NFI3 743 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 ZBTB45Q96K62 511 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 FAM193BQ96PV7 902 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 GAS2L1Q99501 681 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 GBP3Q9H0R5 595 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 TOPORSQ9NS56 1045 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-204ENST00000370496 KLK14Q9P0G3 267 aa16.23■□□□□ 0.19
COL9A1-204ENST00000370496 CHD7Q9P2D1 2997 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 ABLIM1O14639 778 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 EIF3DO15371 548 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL9A1-204ENST00000370496 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
COL9A1-204ENST00000370496 PRPF6O94906 941 aaKnown RBP16.22■□□□□ 0.19
COL9A1-204ENST00000370496 POMCP01189 267 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
COL9A1-204ENST00000370496 GRM5P41594 1212 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 SCNN1GP51170 649 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 MCL1Q07820 350 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 KMT5BQ4FZB7 885 aa16.22■□□□□ 0.19
COL9A1-204ENST00000370496 THNSL1Q8IYQ7 743 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms