RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PRSS55Q6UWB4 352 aaPredicted RBP17.19■□□□□ 0.34
SSR4-204ENST00000370087 RNF149Q8NC42 400 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 GSTCDQ8NEC7 633 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 SLC7A3Q8WY07 619 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 JPH2Q9BR39 696 aaPredicted RBP17.19■□□□□ 0.34
SSR4-204ENST00000370087 PLEKHA4Q9H4M7 779 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
SSR4-204ENST00000370087 DPP7Q9UHL4 492 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 PCDHA4Q9UN74 947 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 EPG5Q9HCE0 2579 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 ZBTB39O15060 712 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 ZMYND10O75800 440 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 FSHRP23945 695 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 QARSP47897 775 aaKnown RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 SNW1Q13573 536 aaKnown RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 EMC2Q15006 297 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 GRASPQ7Z6J2 395 aaPredicted RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 KCNB2Q92953 911 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 AIFM3Q96NN9 605 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 SH3GLB2Q9NR46 395 aa17.18■□□□□ 0.34
SSR4-204ENST00000370087 DDX25Q9UHL0 483 aaKnown RBP17.18■□□□□ 0.34
SSR4-204ENST00000370087 KINO60870 393 aaKnown RBP17.17■□□□□ 0.34
SSR4-204ENST00000370087 AKAP5P24588 427 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 AMHR2Q16671 573 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
SSR4-204ENST00000370087 CNNM3Q8NE01 707 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 PAAF1Q9BRP4 392 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 SPATA6Q9NWH7 488 aaPredicted RBP17.17■□□□□ 0.34
SSR4-204ENST00000370087 FNIP2Q9P278 1114 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 FBXW11Q9UKB1 542 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 SNX14Q9Y5W7 946 aa17.17■□□□□ 0.34
SSR4-204ENST00000370087 KANSL1LA0AUZ9 987 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 ERLIN2O94905 339 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 CD72P21854 359 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 RPS6KB1P23443 525 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 PDIA3P30101 505 aaKnown RBP17.16■□□□□ 0.34
SSR4-204ENST00000370087 RFC5P40937 340 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 MLF2Q15773 248 aaPredicted RBP17.16■□□□□ 0.34
SSR4-204ENST00000370087 INF2Q27J81 1249 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 MOXD1Q6UVY6 613 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 BLIDQ8IZY5 108 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 ITFG1Q8TB96 612 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 LXNQ9BS40 222 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.16■□□□□ 0.348e-7■□□□□ 11.2
SSR4-204ENST00000370087 RGL1Q9NZL6 768 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 KLK14Q9P0G3 267 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 CDH7Q9ULB5 785 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 COL4A2P08572 1712 aa17.16■□□□□ 0.34
SSR4-204ENST00000370087 ADAM12O43184 909 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 B4GALT5O43286 388 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 C1RP00736 705 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 P4HBP07237 508 aaKnown RBP17.15■□□□□ 0.34
SSR4-204ENST00000370087 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
SSR4-204ENST00000370087 PTENP60484 403 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 MBTD1Q05BQ5 628 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 UBXN2BQ14CS0 331 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 VARS2Q5ST30 1063 aaKnown RBP17.15■□□□□ 0.34
SSR4-204ENST00000370087 NOTUMQ6P988 496 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 BLOC1S2Q6QNY1 142 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 FBXL16Q8N461 479 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 DAGLBQ8NCG7 672 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 ASAP3Q8TDY4 903 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 FGF13Q92913 245 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 KXD1Q9BQD3 176 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 NCDNQ9UBB6 729 aa17.15■□□□□ 0.34
SSR4-204ENST00000370087 CCL16O15467 120 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 ARF4P18085 180 aaPredicted RBP17.14■□□□□ 0.33
SSR4-204ENST00000370087 ATXN1P54253 815 aaKnown RBP17.14■□□□□ 0.33
SSR4-204ENST00000370087 CSTF1Q05048 431 aaKnown RBP17.14■□□□□ 0.33
SSR4-204ENST00000370087 CAPSQ13938 189 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 ZNF528Q3MIS6 628 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 TSSK4Q6SA08 328 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 HAS1Q92839 578 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 CCDC51Q96ER9 411 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 DYDC2Q96IM9 177 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 HCFC1R1Q9NWW0 138 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 FBXO4Q9UKT5 387 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 GIT1Q9Y2X7 761 aa17.14■□□□□ 0.33
SSR4-204ENST00000370087 SPTBN2O15020 2390 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
SSR4-204ENST00000370087 SPTLC1O15269 473 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms